Evidence map›Paper›PMID 21821763›Full record

ArticleApplied and environmental microbiology2011

Identification of a transcriptional repressor involved in benzoate metabolism in Geobacter bemidjiensis.

Toshiyuki Ueki

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Toshiyuki UekiDepartment of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, USA. tueki@microbio.umass.edu
University of Massachusetts Amherst · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Subsurface environments contaminated with aromatic compounds can be remediated in situ by Geobacter species. A transcription factor that represses expression of bamA, a benzoate-inducible gene, in Geobacter bemidjiensis during growth with acetate was identified. It is likely that this repressor also regulates other genes involved in aromatic compound metabolism.

Indexed as

Gene Expression Regulation, BacterialAcetatesBase SequenceBenzoatesDNA FootprintingGeobacterModels, BiologicalMolecular Sequence DataPromoter Regions, GeneticProtein BindingRepressor ProteinsTranscription, GeneticWater PollutantsWater Pollutants, ChemicalAcetatesBenzoatesRepressor ProteinsWater PollutantsWater Pollutants, Chemical

Identifiers

PMID21821763
PMCPMC3187116
OpenAlexW2048081483

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.