Evidence map›Paper›PMID 21821658›Full record

ArticleNucleic acids research2011

Thermococcus kodakarensis encodes three MCM homologs but only one is essential.

Miao Pan, Thomas J Santangelo, Zhuo Li, John N Reeve, Zvi Kelman

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Open biology · 2020
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Genome Replication inFrontiers in microbiology · 2017
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Archaeology of eukaryotic DNA replication.Cold Spring Harbor perspectives in biology · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Miao PanInstitute for Bioscience and Biotechnology Research, University of Maryland, 9600 Gudelsky Drive, Rockville, MD 20850, USA.
Thomas J Santangelo
Zhuo Li
John N Reeve
Zvi Kelman
The Ohio State University · USAdvanced Bioscience Laboratories (United States) · US

Funding

HISTONES AND NUCLEOSOMES IN ARCHAEA (ARCHAEBACTERIA)R01GM053185 · NIGMS · OHIO STATE UNIVERSITY · PI REEVE, JOHN NEWTON · 1995 to 2007
$1.7M
Archaeal Transcription TerminationF32GM073336 · NIGMS · OHIO STATE UNIVERSITY · PI SANTANGELO, THOMAS JAMES · 2005 to 2007
$151k
NIGMS NIH HHS GM073336NIGMS NIH HHS GM53185NIGMS NIH HHS R01 GM053185
6 · The paper itself

Abstract

The minichromosome maintenance (MCM) complex is thought to function as the replicative helicase in archaea and eukaryotes. In eukaryotes, this complex is an assembly of six different but related polypeptides (MCM2-7) but, in most archaea, one MCM protein assembles to form a homohexameric complex. Atypically, the Thermococcus kodakarensis genome encodes three archaeal MCM homologs, here designated MCM1-3, although MCM1 and MCM2 are unusual in having long and unique N-terminal extensions. The results reported establish that MCM2 and MCM3 assemble into homohexamers and exhibit DNA binding, helicase and ATPase activities in vitro typical of archaeal MCMs. In contrast, MCM1 does not form homohexamers and although MCM1 binds DNA and has ATPase activity, it has only minimal helicase activity in vitro. Removal of the N-terminal extension had no detectable effects on MCM1 but increased the helicase activity of MCM2. A T. kodakarensis strain with the genes TK0096 (MCM1) and TK1361 (MCM2) deleted has been constructed that exhibits no detectable defects in growth or viability, but all attempts to delete TK1620 (MCM3) have been unsuccessful arguing that that MCM3 is essential and is likely the replicative helicase in T. kodakarensis. The origins and possible function(s) of the three MCM proteins are discussed.

Indexed as

Adenosine TriphosphateArchaeal ProteinsDNADNA-Binding ProteinsDNA HelicasesGenome, ArchaealMicrobial ViabilitySequence DeletionThermococcusAdenosine TriphosphateArchaeal ProteinsDNADNA-Binding ProteinsDNA Helicases

Identifiers

PMID21821658
PMCPMC3239210
OpenAlexW2163882140

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.