Evidence map›Paper›PMID 21814569›Full record

ArticlePloS one2011

HrpA, a DEAH-box RNA helicase, is involved in global gene regulation in the Lyme disease spirochete.

Aydan Salman-Dilgimen, Pierre-Olivier Hardy, Ashley R Dresser, George Chaconas

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Evolution toward extremely high imipenem resistance inAntimicrobial agents and chemotherapy · 2024
    Article
  2. Evolution towards extremely high β-lactam resistance inbioRxiv : the preprint server for biology · 2024
    Article
  3. Article
  4. Article
  5. Large-scale ratcheting in a bacterial DEAH/RHA-type RNA helicase that modulates antibiotics susceptibility.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. Article
  7. Interaction betweenBiology · 2021
    Article
  8. Lyme Disease Pathogenesis.Current issues in molecular biology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Aydan Salman-DilgimenDepartment of Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta, Canada.
Pierre-Olivier Hardy
Ashley R Dresser
George Chaconas
University of Calgary · CA

Funding

Canadian Institutes of Health Research MOP 53086
6 · The paper itself

Abstract

Spirochetes causing Lyme borreliosis are obligate parasites that can only be found in a tick vector or a vertebrate host. The ability to survive in these two disparate environments requires up and downregulation of specific genes by regulatory circuits that remain largely obscure. In this work on the Lyme spirochete, B. burgdorferi, we show that a disruption of the hrpA gene, which encodes a putative RNA helicase, results in a complete loss in the ability of the spirochetes to infect mice by needle inoculation. Studies of protein expression in culture by 2D gels revealed a change in the expression of 33 proteins in hrpA clones relative to the wild-type parent. Quantitative characterization of protein expression by iTRAQ analysis revealed a total of 187 differentially regulated proteins in an hrpA background: 90 downregulated and 97 upregulated. Forty-two of the 90 downregulated and 65 of the 97 upregulated proteins are not regulated under any conditions by the previously reported regulators in B. burgdorferi (bosR, rrp2, rpoN, rpoS or rrp1). Downregulated and upregulated proteins also fell into distinct functional categories. We conclude that HrpA is part of a new and distinct global regulatory pathway in B. burgdorferi gene expression. Because an HrpA orthologue is present in many bacteria, its participation in global regulation in B. burgdorferi may have relevance in other bacterial species where its function remains obscure. We believe this to be the first report of a role for an RNA helicase in a global regulatory pathway in bacteria. This finding is particularly timely with the recent growth of the field of RNA regulation of gene expression and the ability of RNA helicases to modulate RNA structure and function.

Indexed as

Gene DeletionGene Expression Regulation, BacterialAnimalsBlotting, WesternBorrelia burgdorferiChromatography, LiquidDEAD-box RNA HelicasesElectrophoresis, Gel, Two-DimensionalLyme DiseaseMaleMiceMice, Inbred C3HReverse Transcriptase Polymerase Chain ReactionRNA, BacterialRNA, MessengerSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationDEAD-box RNA HelicasesRNA, BacterialRNA, Messenger

Identifiers

PMID21814569
PMCPMC3144200
OpenAlexW2050002984

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.