Evidence map›Paper›PMID 21813718›Full record

ArticleJournal of clinical microbiology2011

An international collaboration to standardize HIV-2 viral load assays: results from the 2009 ACHI(E)V(2E) quality control study.

F Damond, A Benard, Claudia Balotta, Jürg Böni, Matthew Cotten, Vitor Duque, Bridget Ferns, Jeremy Garson, Perpetua Gomes, Fátima Gonçalves and 11 more

Open access · greenAbstract readEvaluation StudyMulticenter Study
In one paragraph

Article in Journal of clinical microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. The first case of HIV-2 in Scotland.Access microbiology · 2020
    Article
  4. Article
  5. Article
  6. Article
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  12. Validation for clinical use of a novel HIV-2 plasma RNA viral load assay using the Abbott m2000 platform.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 15 institutions in 10 countries.

F DamondAPHP, Hôpital Bichat-Claude Bernard, Laboratoire de Virologie, Paris F-75018, France. florence.damond@bch.aphp.fr
A Benard
Claudia Balotta
Jürg Böni
Matthew Cotten
Vitor Duque
Bridget Ferns
Jeremy Garson
Perpetua Gomes
Fátima Gonçalves
Geoffrey Gottlieb
Bernd Kupfer
Jean Ruelle
Berta Rodes
Vicente Soriano
Mark Wainberg
Audrey Taieb
Sophie Matheron
Genevieve Chene
Francoise Brun-Vezinet
ACHI(E)V(2E) Study Group
Inserm · FRUniversity College London · GBDélégation Paris 7 · FREscola Superior de Saúde Egas Moniz · PTHôpital Bichat-Claude-Bernard · FRHospitais da Universidade de Coimbra · PTHospital de Egas Moniz · PTLuigi Sacco Hospital · ITMcGill University · CAMRC Unit the Gambia · GMUCLouvain · BEUniversité Paris Cité · FRUniversity of Bonn · DEUniversity of Washington · USUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accurate HIV-2 plasma viral load quantification is crucial for adequate HIV-2 patient management and for the proper conduct of clinical trials and international cohort collaborations. This study compared the homogeneity of HIV-2 RNA quantification when using HIV-2 assays from ACHI(E)V(2E) study sites and either in-house PCR calibration standards or common viral load standards supplied to all collaborators. Each of the 12 participating laboratories quantified blinded HIV-2 samples, using its own HIV-2 viral load assay and standard as well as centrally validated and distributed common HIV-2 group A and B standards (http://www.hiv.lanl.gov/content/sequence/HelpDocs/subtypes-more.html). Aliquots of HIV-2 group A and B strains, each at 2 theoretical concentrations (2.7 and 3.7 log(10) copies/ml), were tested. Intralaboratory, interlaboratory, and overall variances of quantification results obtained with both standards were compared using F tests. For HIV-2 group A quantifications, overall and interlaboratory and/or intralaboratory variances were significantly lower when using the common standard than when using in-house standards at the concentration levels of 2.7 log(10) copies/ml and 3.7 log(10) copies/ml, respectively. For HIV-2 group B, a high heterogeneity was observed and the variances did not differ according to the type of standard used. In this international collaboration, the use of a common standard improved the homogeneity of HIV-2 group A RNA quantification only. The diversity of HIV-2 group B, particularly in PCR primer-binding regions, may explain the heterogeneity in quantification of this strain. Development of a validated HIV-2 viral load assay that accurately quantifies distinct circulating strains is needed.

Indexed as

HIV-2HIV InfectionsHumansInternational CooperationObserver VariationPlasmaQuality ControlReference StandardsReproducibility of ResultsViral Load

Identifiers

PMID21813718
PMCPMC3187346
OpenAlexW2141177835

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.