Evidence map›Paper›PMID 21811408›Full record

ArticlePLoS pathogens2011

Global mRNA degradation during lytic gammaherpesvirus infection contributes to establishment of viral latency.

Justin M Richner, Karen Clyde, Andrea C Pezda, Benson Yee Hin Cheng, Tina Wang, G Renuka Kumar, Sergio Covarrubias, Laurent Coscoy, Britt Glaunsinger

Abstract read
In one paragraph

Article in PLoS pathogens, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

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  16. The mProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Justin M RichnerDepartment of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, United States of America.
Karen Clyde
Andrea C Pezda
Benson Yee Hin Cheng
Tina Wang
G Renuka Kumar
Sergio Covarrubias
Laurent Coscoy
Britt Glaunsinger

Funding

Disruption of Cellular RNA Processing by Kaposi's Sarcoma-Associated HerpesvirusR01CA136367 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI Britt A Glaunsinger · 2010 to 2026
$5.8M
Shutoff of cellular gene expression by Kaposi's sarcoma-associated herpesvirusK01CA117982 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI GLAUNSINGER, BRITT A · 2006 to 2010
$778k
NCI NIH HHS K01 CA117982NCI NIH HHS K01-CA117982NCI NIH HHS R01 CA136367NCI NIH HHS R01-CA136367
6 · The paper itself

Abstract

During a lytic gammaherpesvirus infection, host gene expression is severely restricted by the global degradation and altered 3' end processing of mRNA. This host shutoff phenotype is orchestrated by the viral SOX protein, yet its functional significance to the viral lifecycle has not been elucidated, in part due to the multifunctional nature of SOX. Using an unbiased mutagenesis screen of the murine gammaherpesvirus 68 (MHV68) SOX homolog, we isolated a single amino acid point mutant that is selectively defective in host shutoff activity. Incorporation of this mutation into MHV68 yielded a virus with significantly reduced capacity for mRNA turnover. Unexpectedly, the MHV68 mutant showed little defect during the acute replication phase in the mouse lung. Instead, the virus exhibited attenuation at later stages of in vivo infections suggestive of defects in both trafficking and latency establishment. Specifically, mice intranasally infected with the host shutoff mutant accumulated to lower levels at 10 days post infection in the lymph nodes, failed to develop splenomegaly, and exhibited reduced viral DNA levels and a lower frequency of latently infected splenocytes. Decreased latency establishment was also observed upon infection via the intraperitoneal route. These results highlight for the first time the importance of global mRNA degradation during a gammaherpesvirus infection and link an exclusively lytic phenomenon with downstream latency establishment.

Indexed as

RNA StabilityAnimalsChlorocebus aethiopsCOS CellsFemaleHEK293 CellsHerpesviridae InfectionsHumansLungMiceNIH 3T3 CellsRhadinovirusRNA, MessengerSOX Transcription FactorsVero CellsViral ProteinsRNA, MessengerSOX Transcription FactorsViral Proteins

Identifiers

PMID21811408
PMCPMC3141057

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.