Evidence map›Paper›PMID 21810415›Full record

ArticleDevelopmental biology2011

BzpF is a CREB-like transcription factor that regulates spore maturation and stability in Dictyostelium.

Eryong Huang, Shaheynoor Talukder, Timothy R Hughes, Tomaz Curk, Blaz Zupan, Gad Shaulsky, Mariko Katoh-Kurasawa

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. The Proteome ofProteomes · 2026
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  3. Application of Nucleic Acid Mimics in Fluorescence In Situ Hybridization.Methods in molecular biology (Clifton, N.J.) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Eryong HuangDepartment of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.
Shaheynoor Talukder
Timothy R Hughes
Tomaz Curk
Blaz Zupan
Gad Shaulsky
Mariko Katoh-Kurasawa
Baylor College of Medicine · USUniversity of Ljubljana · SIUniversity of Toronto · CA

Funding

PROJECT III - Computational Analysis of Phenotypes andP01HD039691 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI KUSPA, ADAM, SHAULSKY, GAD · 2001 to 2016
$14.4M
CIHR MOP-77721NICHD NIH HHS P01 HD039691NICHD NIH HHS P01 HD39691
6 · The paper itself

Abstract

The cAMP response element-binding protein (CREB) is a highly conserved transcription factor that integrates signaling through the cAMP-dependent protein kinase A (PKA) in many eukaryotes. PKA plays a critical role in Dictyostelium development but no CREB homologue has been identified in this system. Here we show that Dictyostelium utilizes a CREB-like protein, BzpF, to integrate PKA signaling during late development. bzpF(-) mutants produce compromised spores, which are extremely unstable and germination defective. Previously, we have found that BzpF binds the canonical CRE motif in vitro. In this paper, we determined the DNA binding specificity of BzpF using protein binding microarray (PBM) and showed that the motif with the highest specificity is a CRE-like sequence. BzpF is necessary to activate the transcription of at least 15 PKA-regulated, late-developmental target genes whose promoters contain BzpF binding motifs. BzpF is sufficient to activate two of these genes. The comparison of RNA sequencing data between wild type and bzpF(-) mutant revealed that the mutant fails to express 205 genes, many of which encode cellulose-binding and sugar-binding proteins. We propose that BzpF is a CREB-like transcription factor that regulates spore maturation and stability in a PKA-related manner.

Indexed as

Cyclic AMP-Dependent Protein KinasesCyclic AMP Response Element-Binding ProteinDictyosteliumDNA PrimersMicroarray AnalysisPlasmidsProtein BindingReverse Transcriptase Polymerase Chain ReactionSequence Analysis, RNASignal TransductionSpores, ProtozoanCyclic AMP-Dependent Protein KinasesCyclic AMP Response Element-Binding ProteinDNA Primers

Identifiers

PMID21810415
PMCPMC3180911
OpenAlexW2069229822

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.