Evidence map›Paper›PMID 21807091›Full record

ArticleFree radical biology & medicine2011

LC/ESR/MS study of pH-dependent radical generation from 15-LOX-catalyzed DPA peroxidation.

Preeti Purwaha, Yan Gu, Uddhav Kelavkar, Jing X Kang, Benedict Law, Erxi Wu, Steven Y Qian

Open access · greenAbstract read
In one paragraph

Article in Free radical biology & medicine, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Preeti PurwahaDepartment of Pharmaceutical Sciences, College of Pharmacy, Nursing, and Allied Sciences, North Dakota State University, Fargo, ND 58105, USA.
Yan Gu
Uddhav Kelavkar
Jing X Kang
Benedict Law
Erxi Wu
Steven Y Qian
North Dakota State University · USMassachusetts General Hospital · USMercer University · US

Funding

TARGETING AND DELIVERYP20RR015566 · NCRR · NORTH DAKOTA STATE UNIVERSITY · PI SIBI, MUKUND P. · 2001 to 2011
$19.0M
VIGILANCE AND AVOIDANCE IN AFFECTIVE VISUAL PROCESSINGP20RR020151 · NCRR · NORTH DAKOTA STATE UNIVERSITY · PI MCCOURT, MARK E. · 2004 to 2011
$15.2M
Center for Visual and Cognitive NeuroscienceP20GM103505 · NIGMS · NORTH DAKOTA STATE UNIVERSITY · PI MCCOURT, MARK E. · 2012 to 2014
$6.3M
Pilot Projects: Core DP30GM103332 · NIGMS · NORTH DAKOTA STATE UNIVERSITY · PI SIBI, MUKUND P. · 2012 to 2016
$4.9M
Endogenous Radicals, Hepatic Lipid Peroxidation, and ALDK22ES012978 · NIEHS · NORTH DAKOTA STATE UNIVERSITY · PI QIAN, STEVEN Y · 2006 to 2008
$322k
Refinement of LC/ESR/MS for Studying Lipid Free Radicals in Colon Cancer GrowthR15CA140833 · NCI · NORTH DAKOTA STATE UNIVERSITY · PI QIAN, STEVEN Y · 2009 to 2009
$215k
NCI NIH HHS R15 CA140833NCI NIH HHS R15CA140833NCRR NIH HHS P20 RR015566NCRR NIH HHS P20 RR020151NIEHS NIH HHS K22 ES012978NIEHS NIH HHS K22ES-012978NIGMS NIH HHS P20 GM103505NIGMS NIH HHS P30 GM103332
6 · The paper itself

Abstract

Docosapentaenoic acid (DPA) is a unique fatty acid that exists in two isomeric forms (n-3 and n-6), which differ in their physiological behaviors. DPA can undergo free radical-mediated peroxidation via lipoxygenase (LOX). 15-LOX, one of the LOX isomers, has received much attention in cancer research because of its very different expression level in normal tissues compared to tumors and some bioactive fatty acid metabolites modulating the tumorigenic pathways in cancer. However, the mechanism linking 15-LOX, DPA metabolites, and their bioactivities is still unclear, and the free radicals generated in DPA peroxidation have never been characterized. In this study, we have studied radicals formed from both soybean and human cellular (PC3-15LOS cells) 15-LOX-catalyzed peroxidation of DPAs at various pH's using a combination of LC/ESR/MS with the spin trapping technique. We observed a total of three carbon-centered radicals formed in 15-LOX-DPA (n-3) stemming from its 7-, 17-, and 20-hydroperoxides, whereas only one formed from 17-hydroperoxide in DPA (n-6). A change in the reaction pH from 8.5 (15-LOX enzyme optimum) to 7.4 (physiological) and to 6.5 (tumor, acidic) not only decreased the total radical formation but also altered the preferred site of oxygenation. This pH-dependent alteration of radical formation and oxygenation pattern may have significant implications and provide a basis for our ongoing investigations of LOXs as well as fatty acids in cancer biology.

Indexed as

Lipid PeroxidationArachidonate 15-LipoxygenaseArachidonic AcidCatalysisCell Line, TumorChromatography, LiquidElectron Spin Resonance SpectroscopyFatty Acids, UnsaturatedFree RadicalsGlycine maxHumansHydrogen-Ion ConcentrationIsomerismMaleMass SpectrometryNeoplasm ProteinsArachidonate 15-LipoxygenaseArachidonic Aciddocosapentaenoic acidFatty Acids, UnsaturatedFree RadicalsNeoplasm ProteinsPeroxidesPlant Proteins

Identifiers

PMID21807091
PMCPMC3163775
OpenAlexW1972947504

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.