ArticleThe VLDB journal : very large data bases : a publication of the VLDB Endowment2011
Performance analysis of a dual-tree algorithm for computing spatial distance histograms.
Article in The VLDB journal : very large data bases : a publication of the VLDB Endowment, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
6 citing papers in PubMed.
- Computing Spatial Distance Histograms for Large Scientific Datasets On-the-Fly.IEEE transactions on knowledge and data engineering · 2014Article
- Performance Modeling in CUDA Streams - A Means for High-Throughput Data Processing.Proceedings : ... IEEE International Conference on Big Data. IEEE International Conference on Big Data · 2014Article
- Efficient SDH Computation In Molecular Simulations Data.ACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine · 2012Article
- Approximate Algorithms for Computing Spatial Distance Histograms with Accuracy Guarantees.IEEE transactions on knowledge and data engineering · 2012Article
- Distance Histogram Computation Based on Spatiotemporal Uniformity in Scientific Data.Advances in database technology : proceedings. International Conference on Extending Database Technology · 2012Article
- DCMS: A data analytics and management system for molecular simulation.Journal of big dataArticle
Corrections and comments
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Authors and funding
3 authors.
Funding
Abstract
Many scientific and engineering fields produce large volume of spatiotemporal data. The storage, retrieval, and analysis of such data impose great challenges to database systems design. Analysis of scientific spatiotemporal data often involves computing functions of all point-to-point interactions. One such analytics, the Spatial Distance Histogram (SDH), is of vital importance to scientific discovery. Recently, algorithms for efficient SDH processing in large-scale scientific databases have been proposed. These algorithms adopt a recursive tree-traversing strategy to process point-to-point distances in the visited tree nodes in batches, thus require less time when compared to the brute-force approach where all pairwise distances have to be computed. Despite the promising experimental results, the complexity of such algorithms has not been thoroughly studied. In this paper, we present an analysis of such algorithms based on a geometric modeling approach. The main technique is to transform the analysis of point counts into a problem of quantifying the area of regions where pairwise distances can be processed in batches by the algorithm. From the analysis, we conclude that the number of pairwise distances that are left to be processed decreases exponentially with more levels of the tree visited. This leads to the proof of a time complexity lower than the quadratic time needed for a brute-force algorithm and builds the foundation for a constant-time approximate algorithm. Our model is also general in that it works for a wide range of point spatial distributions, histogram types, and space-partitioning options in building the tree.
Identifiers
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.