Evidence map›Paper›PMID 21800339›Full record

ArticleHepatology (Baltimore, Md.)2011

Hepatitis C virus induces interferon-λ and interferon-stimulated genes in primary liver cultures.

Svetlana Marukian, Linda Andrus, Timothy P Sheahan, Christopher T Jones, Edgar D Charles, Alexander Ploss, Charles M Rice, Lynn B Dustin

Open access · bronzeAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers.

0numbers the graph read from it
0cells of the map it votes in
104citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

104 citing papers in PubMed, 166 citations in OpenAlex.

  1. Article
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  3. Review
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  5. Review
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  7. Article
  8. Interferon-Lambda 1 InhibitsFrontiers in pharmacology · 2021
    Article
  9. Review
  10. Interferon Lambda's New Role as Regulator of Neutrophil Function.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2019
    Review
  11. Article
  12. Type III IFNs: Beyond antiviral protection.Seminars in immunology · 2019
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Organotypic models of type III interferon-mediated protection from Zika virus infections at the maternal-fetal interface.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  18. Article
  19. Article
  20. Article

44 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Svetlana MarukianCenter for the Study of Hepatitis C, Laboratory of Virology and Infectious Disease, Rockefeller University, New York, NY 10065, USA.
Linda Andrus
Timothy P Sheahan
Christopher T Jones
Edgar D Charles
Alexander Ploss
Charles M Rice
Lynn B Dustin
Rockefeller University · US

Funding

Modeling human hepatotropic infections in complex tissue organoidsR01DK085713 · NIDDK · ROCKEFELLER UNIVERSITY · PI BHATIA, SANGEETA N., RICE, CHARLES M · 2009 to 2013
$5.6M
Immune complexes: Origins and effects in HCV infectionR01AI060561 · NIAID · UNIVERSITY OF OXFORD · PI DUSTIN, LYNN B · 2003 to 2015
$3.9M
Simianizing hepatitis C: Defining the species-tropism of a hepatotropic virusR01AI090055 · NIAID · ROCKEFELLER UNIVERSITY · PI RICE, CHARLES M · 2010 to 2014
$2.1M
The Pathogenesis of Autoimmunity in Hepatitis C Virus InfectionK08AI075031 · NIAID · ROCKEFELLER UNIVERSITY · PI CHARLES, EDGAR D · 2008 to 2012
$802k
Hepatitis C virus host interactions in micropatterened hepatocyte co-culturesF32AI084448 · NIAID · ROCKEFELLER UNIVERSITY · PI SHEAHAN, TIMOTHY PATRICK · 2009 to 2011
$151k
NIAID NIH HHS F32 AI084448NIAID NIH HHS K08 AI075031NIAID NIH HHS R01 AI060561NIAID NIH HHS R01 AI090055NIAID NIH HHS R01 AI60561NIDDK NIH HHS R01 DK085713
6 · The paper itself

Abstract

unlabelledHepatitis C virus (HCV) replication in primary liver cells is less robust than that in hepatoma cell lines, suggesting that innate antiviral mechanisms in primary cells may limit HCV replication or spread. Here we analyzed the expression of 47 genes associated with interferon (IFN) induction and signaling following HCV infection of primary human fetal liver cell (HFLC) cultures from 18 different donors. We report that cell culture-produced HCV (HCVcc) induced expression of Type III (λ) IFNs and of IFN-stimulated genes (ISGs). Little expression of Type I IFNs was detected. Levels of IFNλ and ISG induction varied among donors and, often, between adapted and nonadapted HCV chimeric constructs. Higher levels of viral replication were associated with greater induction of ISGs and of λ IFNs. Gene induction was dependent on HCV replication, as ultraviolet light-inactivated virus was not stimulatory and an antiviral drug, 2'-C-methyladenosine, reduced induction of λ IFNs and ISGs. The level of IFNλ protein induced was sufficient to inhibit HCVcc infection of naïve cultures.

conclusionTogether, these results indicate that despite its reported abilities to blunt the induction of an IFN response, HCV infection is capable of inducing antiviral cytokines and pathways in primary liver cell cultures. Induction of ISGs and λ IFNs may limit the growth and spread of HCV in primary cell cultures and in the infected liver. HCV infection of HFLC may provide a useful model for the study of gene induction by HCV in vivo.

Indexed as

AdenosineCells, CulturedGene Expression ProfilingHepacivirusHumansInterferon LambdaInterferonsInterleukinsJanus KinasesLiverPrimary Cell CultureRecombinant ProteinsTranscriptional ActivationUltraviolet RaysVirus Replication2'-C-methyladenosineAdenosineInterferon Lambdainterferon-lambda, humanInterferonsInterleukinsJanus KinasesRecombinant Proteins

Identifiers

PMID21800339
PMCPMC3219820
OpenAlexW2091632868

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.