Evidence map›Paper›PMID 21799017›Full record

ArticleThe Journal of biological chemistry2011

Characterization of Gtf1p, the connector subunit of yeast mitochondrial tRNA-dependent amidotransferase.

Mario H Barros, Malgorzata Rak, Janaina A Paulela, Alexander Tzagoloff

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Aep3p-dependent translation of yeast mitochondrialMolecular biology of the cell · 2017
    Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mario H BarrosDepartment of Microbiology, University of São Paulo, 05508-900 São Paulo, Brazil.
Malgorzata Rak
Janaina A Paulela
Alexander Tzagoloff

Funding

ASSEMBLY OF MEMBRANES IN HEART AND YEAST MITOCHONDRIAR01HL022174 · NHLBI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI TZAGOLOFF, ALEXANDER A · 1985 to 2014
$3.3M
HEME A AND CYTOCHROME OXIDASE BIOSYNTHESISR01GM050187 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI TZAGOLOFF, ALEXANDER A · 1994 to 2010
$2.6M
NHLBI NIH HHS R01 HL022174NIGMS NIH HHS GM 50187NIGMS NIH HHS R01 GM050187
6 · The paper itself

Abstract

The bacterial GatCAB operon for tRNA-dependent amidotransferase (AdT) catalyzes the transamidation of mischarged glutamyl-tRNA(Gln) to glutaminyl-tRNA(Gln). Here we describe the phenotype of temperature-sensitive (ts) mutants of GTF1, a gene proposed to code for subunit F of mitochondrial AdT in Saccharomyces cerevisiae. The ts gtf1 mutants accumulate an electrophoretic variant of the mitochondrially encoded Cox2p subunit of cytochrome oxidase and an unstable form of the Atp8p subunit of the F(1)-F(0) ATP synthase that is degraded, thereby preventing assembly of the F(0) sector. Allotopic expression of recoded ATP8 and COX2 did not significantly improve growth of gtf1 mutants on respiratory substrates. However, ts gft1 mutants are partially rescued by overexpression of PET112 and HER2 that code for the yeast homologues of the catalytic subunits of bacterial AdT. Additionally, B66, a her2 point mutant has a phenotype similar to that of gtf1 mutants. These results provide genetic support for the essentiality, in vivo, of the GatF subunit of the heterotrimeric AdT that catalyzes formation of glutaminyl-tRNA(Gln) (Frechin, M., Senger, B., Brayé, M., Kern, D., Martin, R. P., and Becker, H. D. (2009) Genes Dev. 23, 1119-1130).

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceAmino Acyl-tRNA SynthetasesAntimycin AGene Expression Regulation, FungalGenes, MitochondrialMitochondriaMutationNADH DehydrogenaseNitrogenous Group TransferasesPeptidesPhenotypeProtein BiosynthesisProtein SubunitsProtein TransportRNA, MessengerAdenosine TriphosphatasesAmino Acyl-tRNA SynthetasesantimycinAntimycin Aglutaminyl transamidase subunit F, S cerevisiaeHer2 protein, S cerevisiaeNADH DehydrogenaseNitrogenous Group TransferasesPeptidesProtein SubunitsRNA, MessengerRNA, TransferSaccharomyces cerevisiae Proteins

Identifiers

PMID21799017
PMCPMC3190888

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.