Evidence map›Paper›PMID 21798295›Full record

ArticleVirus research2011

Characterization of the spike protein of human coronavirus NL63 in receptor binding and pseudotype virus entry.

Han-Xin Lin, Yan Feng, Xinming Tu, Xuesen Zhao, Chih-Heng Hsieh, Lauren Griffin, Murray Junop, Chengsheng Zhang

Abstract read
In one paragraph

Article in Virus research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Han-Xin LinDepartment of Pathology and Molecular Medicine, McMaster University, Canada.
Yan Feng
Xinming Tu
Xuesen Zhao
Chih-Heng Hsieh
Lauren Griffin
Murray Junop
Chengsheng Zhang

Funding

Canadian Institutes of Health Research MOP53209Canadian Institutes of Health Research MOP68955
6 · The paper itself

Abstract

The spike (S) protein of human coronavirus NL63 (HCoV-NL63) mediates both cell attachment by binding to its receptor hACE2 and membrane fusion during virus entry. We have previously identified the receptor-binding domain (RBD) and residues important for RBD-hACE2 association. Here, we further characterized the S protein by investigating the roles of the cytoplasmic tail and 19 residues located in the RBD in protein accumulation, receptor binding, and pseudotype virus entry. For these purposes, we first identified an entry-efficient S gene template from a pool of gene variants and used it as a backbone to generate a series of cytoplasmic tail deletion and single residue substitution mutants. Our results showed that: (i) deletion of 18aa from the C-terminus enhanced the S protein accumulation and virus entry, which might be due to the deletion of intracellular retention signals; (ii) further deletion to residue 29 also enhanced the amount of S protein on the cell surface and in virion, but reduced virus entry by 25%, suggesting that residues 19-29 contributes to membrane fusion; (iii) a 29aa-deletion mutant had a defect in anchoring on the plasma membrane, which led to a dramatic decrease of S protein in virion and virus entry; (iv) a total of 15 residues (Y498, V499, V531, G534, G537, D538, S540, G575, S576, E582, W585, Y590, T591, V593 and G594) within RBD were important for receptor binding and virus entry. They probably form three receptor binding motifs, and the third motif is conserved between NL63 and SARS-CoV.

Indexed as

Virus InternalizationAmino Acid SubstitutionCell LineCoronavirus NL63, HumanHumansMembrane GlycoproteinsMutant ProteinsProtein BindingReceptors, VirusSequence DeletionSpike Glycoprotein, CoronavirusViral Envelope ProteinsMembrane GlycoproteinsMutant ProteinsReceptors, VirusSpike Glycoprotein, Coronavirusspike glycoprotein, SARS-CoVspike protein, mouse hepatitis virusViral Envelope Proteins

Identifiers

PMID21798295
PMCPMC7114368

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.