Evidence map›Paper›PMID 21796618›Full record

ArticleInternational journal of cancer2012

Inactivation of the putative suppressor gene DOK1 by promoter hypermethylation in primary human cancers.

Amandine Saulnier, Thomas Vaissière, Jiping Yue, Maha Siouda, Marine Malfroy, Rosita Accardi, Marion Creveaux, Sinto Sebastian, Naveed Shahzad, Tarik Gheit and 20 more

Open access · greenAbstract read
In one paragraph

Article in International journal of cancer, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

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  16. Maintaining the unmethylated state.Clinical epigenetics · 2013
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 10 institutions in 7 countries.

Amandine SaulnierInternational Agency for Research on Cancer (IARC), Lyon, France.
Thomas Vaissière
Jiping Yue
Maha Siouda
Marine Malfroy
Rosita Accardi
Marion Creveaux
Sinto Sebastian
Naveed Shahzad
Tarik Gheit
Ishraq Hussain
Mariela Torrente
Fausto Antonio Maffini
Luca Calabrese
Fausto Chiesa
Cyrille Cuenin
Ruchi Shukla
Ikbal Fathallah
Elena Matos
Alexander Daudt
Sergio Koifman
Victor Wünsch-Filho
Ana M B Menezes
Maria-Paula Curado
David Zaridze
Paolo Boffetta
Paul Brennan
Massimo Tommasino
Zdenko Herceg
Bakary S Sylla
Centre International de Recherche sur le Cancer · FRRipamonti · ITEscola Nacional de Saúde Pública · BREuropean Institute of Oncology · ITHospital de Clínicas de Porto Alegre · BRRussian Cancer Research Center NN Blokhin · RUUniversidade de São Paulo · BRUniversidade Federal de Pelotas · BRUniversity of Buenos Aires · ARUniversity of Chile · CL

Funding

Role of epigenetic changes induced by dietary and environmental factors in cancerR03CA122396 · NCI · INTERNATIONAL AGENCY FOR RES ON CANCER · PI HERCEG, ZDENKO · 2006 to 2007
$113k
NCI NIH HHS R03 CA122396
6 · The paper itself

Abstract

The DOK1 gene is a putative tumour suppressor gene located on the human chromosome 2p13 which is frequently rearranged in leukaemia and other human tumours. We previously reported that the DOK1 gene can be mutated and its expression down-regulated in human malignancies. However, the mechanism underlying DOK1 silencing remains largely unknown. We show here that unscheduled silencing of DOK1 expression through aberrant hypermethylation is a frequent event in a variety of human malignancies. DOK1 was found to be silenced in nine head and neck cancer (HNC) cell lines studied and DOK1 CpG hypermethylation correlated with loss of gene expression in these cells. DOK1 expression could be restored via demethylating treatment using 5-aza-2'deoxycytidine. In addition, transduction of cancer cell lines with DOK1 impaired their proliferation, consistent with the critical role of epigenetic silencing of DOK1 in the development and maintenance of malignant cells. We further observed that DOK1 hypermethylation occurs frequently in a variety of primary human neoplasm including solid tumours (93% in HNC, 81% in lung cancer) and haematopoietic malignancy (64% in Burkitt's lymphoma). Control blood samples and exfoliated mouth epithelial cells from healthy individuals showed a low level of DOK1 methylation, suggesting that DOK1 hypermethylation is a tumour specific event. Finally, an inverse correlation was observed between the level of DOK1 gene methylation and its expression in tumour and adjacent non tumour tissues. Thus, hypermethylation of DOK1 is a potentially critical event in human carcinogenesis, and may be a potential cancer biomarker and an attractive target for epigenetic-based therapy.

Indexed as

DNA MethylationPromoter Regions, GeneticAdultAgedAzacitidineCell Line, TumorCyclin-Dependent Kinase Inhibitor p16DecitabineDNA-Binding ProteinsFemaleGenes, Tumor SuppressorHead and Neck NeoplasmsHumansMaleMiddle AgedPhosphoproteinsAzacitidineCyclin-Dependent Kinase Inhibitor p16DecitabineDNA-Binding ProteinsDOK1 protein, humanPhosphoproteinsRASSF1 protein, humanRNA-Binding ProteinsTumor Suppressor Proteins

Identifiers

PMID21796618
PMCPMC3422753
OpenAlexW2081869203

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.