Evidence map›Paper›PMID 21796215›Full record

ArticleGene therapy2012

Benzoate X receptor zinc-finger gene switches for drug-inducible regulation of transcription.

L J Schwimmer, B Gonzalez, C F Barbas

Abstract read
PubMed Publisher
In one paragraph

Article in Gene therapy, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Mammalian synthetic biology: emerging medical applications.Journal of the Royal Society, Interface · 2015
    Review
  2. Article
  3. Light-inducible gene regulation with engineered zinc finger proteins.Methods in molecular biology (Clifton, N.J.) · 2014
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

L J SchwimmerDepartments of Molecular Biology and Chemistry, Skaggs Institute for Chemical Biology, Scripps Research Institute, La Jolla, CA 92037, USA.
B Gonzalez
C F Barbas

Funding

Transcriptional Blockades of HIV-1R01GM065059 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI BARBAS, CARLOS F · 2003 to 2010
$2.8M
NIGMS NIH HHS R01GM065059
6 · The paper itself

Abstract

Targeted zinc-finger (ZF) DNA-binding domains in conjunction with nuclear receptor ligand-binding domains (LBDs) produce chemically inducible gene switches that have applications in gene therapy and proteomic and genomic research. The benzoate X receptor-β (BXRβ) LBD was used to construct homodimer and single-chain ZF transcription factors (ZF(TF)s). These ZF(TF)s specifically regulated the transcription of target genes in response to two ligands, ethyl-4-hydroxybenzoate and propyl-4-hydroxybenzoate, in a dose-dependent manner. The ZF(TF)s also regulated the expression of endogenous intercellular adhesion molecule-1 in response to either ligand. The advantage of BXRβ-based ZF(TF)s is that the ligands are inexpensive and easily synthetically modified, making the system a base for creation of orthogonal ligand-receptor pairs and expanding the gene-switch toolbox.

Indexed as

Gene Expression RegulationGenetic TechniquesReceptors, Cytoplasmic and NuclearTranscription FactorsXenopus ProteinsZinc Fingersbenzoate X receptor, XenopusReceptors, Cytoplasmic and NuclearTranscription FactorsXenopus Proteins

Identifiers

PMID21796215

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.