Evidence map›Paper›PMID 21795514›Full record

ArticleJournal of clinical microbiology2011

Multiple-locus variable-number tandem-repeat analysis genotyping of human Brucella isolates from Turkey.

Selçuk Kiliç, Ivan N Ivanov, Riza Durmaz, Mehmet Refik Bayraktar, Ergin Ayaslioglu, M Hamidullah Uyanik, Hikmet Aliskan, Ekrem Yasar, Gülçin Bayramoglu, Ahmet Arslantürk and 2 more

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. An Evaluation of the Lineage ofVeterinary sciences · 2024
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  7. Genetic diversity ofVeterinary research forum : an international quarterly journal · 2023
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  8. Native circulatingFrontiers in microbiology · 2023
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  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Molecular Characteristics ofFrontiers in microbiology · 2020
    Article
  16. Article
  17. Genetic Diversity ofFrontiers in microbiology · 2019
    Article
  18. Article
  19. Molecular Investigation of the Transmission Pattern ofFrontiers in veterinary science · 2018
    Article
  20. MLVA Genotyping Characteristics of HumanFrontiers in microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Selçuk KiliçRefik Saydam National Public Health Agency, Department of Communicable Diseases Research, Bacterial Zoonoses Research and Reference Laboratory (National Brucellosis Reference Laboratory), Cemal Gursel Street 18, 06100 Sihhiye Ankara, Turkey. selcuk.kilic@rshm.gov.tr
Ivan N Ivanov
Riza Durmaz
Mehmet Refik Bayraktar
Ergin Ayaslioglu
M Hamidullah Uyanik
Hikmet Aliskan
Ekrem Yasar
Gülçin Bayramoglu
Ahmet Arslantürk
Gilles Vergnaud
Todor V Kantardjiev

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A multiple-locus variable-number tandem-repeat analysis (MLVA) was applied to investigate the epidemiological relationship and genetic diversity among 162 human Brucella isolates collected from all geographic regions of Turkey in an 8-year period (2001 to 2008). The isolates were genotyped by using an MLVA assay developed in Orsay, France (MLVA-16(Orsay)) including eight minisatellite (panel 1) and eight microsatellite (panel 2, subdivided into 2A and 2B) markers. Panels 1 and 2A distinguish 14 genotypes; two of these represented 85% of the strains. Panel 2B displayed a very high discriminatory power. Three loci from panel 2B had diversity index values higher than 0.74. MLVA-16(Orsay) yielded 105 genotypes; 73 were represented by a unique isolate, and 32 included two to eight isolates. The isolates from different patients within the same outbreak or from the same patient before first-line therapy and after relapse showed identical genotypes. A number of MLVA genotypes appeared to be partially restricted to some geographic areas and displayed no annual variation, possibly reflecting persistence of genotypes in certain areas for a time span of at least a decade. This study, representing the first molecular typing results of human Brucella isolates from Turkey, indicated that Turkish human Brucella melitensis isolates were most closely related to the neighboring countries' isolates included in the East Mediterranean group.

Indexed as

Minisatellite RepeatsMolecular TypingAdolescentAdultAgedAged, 80 and overBrucellaBrucellosisChildChild, PreschoolFemaleHumansInfantInfant, NewbornMaleMiddle Aged

Identifiers

PMID21795514
PMCPMC3165627

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.