Evidence map›Paper›PMID 21795391›Full record

ArticleMolecular biology of the cell2011

The period of the somite segmentation clock is sensitive to Notch activity.

Woong Kim, Takaaki Matsui, Masataka Yamao, Makoto Ishibashi, Kota Tamada, Toru Takumi, Kenji Kohno, Shigeyuki Oba, Shin Ishii, Yuichi Sakumura and 1 more

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Trunk Muscle Differentiation and Growth in Vertebrates.Results and problems in cell differentiation · 2026
    Review
  4. Novel Splice Variant in theDiagnostics (Basel, Switzerland) · 2025
    Article
  5. Cellular and molecular control of vertebrate somitogenesis.Nature reviews. Molecular cell biology · 2024
    Review
  6. Review
  7. Review
  8. A novel homozygousFrontiers in pediatrics · 2023
    Article
  9. The vertebrate Embryo Clock: Common players dancing to a different beat.Frontiers in cell and developmental biology · 2022
    Review
  10. Time and space in segmentation.Interface focus · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Delta-Notch signalling in segmentation.Arthropod structure & development · 2017
    Review
  18. Article
  19. Anabolic actions of Notch on mature bone.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Woong KimLaboratory of Gene Regulation Research, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan.
Takaaki Matsui
Masataka Yamao
Makoto Ishibashi
Kota Tamada
Toru Takumi
Kenji Kohno
Shigeyuki Oba
Shin Ishii
Yuichi Sakumura
Yasumasa Bessho
Japan Science and Technology Agency · JPKyoto University · JPHiroshima University · JPLife Science Institute · JPNara Institute of Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The number of vertebrae is defined strictly for a given species and depends on the number of somites, which are the earliest metameric structures that form in development. Somites are formed by sequential segmentation. The periodicity of somite segmentation is orchestrated by the synchronous oscillation of gene expression in the presomitic mesoderm (PSM), termed the "somite segmentation clock," in which Notch signaling plays a crucial role. Here we show that the clock period is sensitive to Notch activity, which is fine-tuned by its feedback regulator, Notch-regulated ankyrin repeat protein (Nrarp), and that Nrarp is essential for forming the proper number and morphology of axial skeleton components. Null-mutant mice for Nrarp have fewer vertebrae and have defective morphologies. Notch activity is enhanced in the PSM of the Nrarp(-/-) embryo, where the ~2-h segmentation period is extended by 5 min, thereby forming fewer somites and their resultant vertebrae. Reduced Notch activity partially rescues the Nrarp(-/-) phenotype in the number of somites, but not in morphology. Therefore we propose that the period of the somite segmentation clock is sensitive to Notch activity and that Nrarp plays essential roles in the morphology of vertebrae and ribs.

Indexed as

Biological ClocksGene Expression Regulation, DevelopmentalAnimalsEmbryo, MammalianEmbryonic DevelopmentFemaleGene Expression ProfilingIntracellular Signaling Peptides and ProteinsMaleMiceMice, KnockoutPregnancyProteinsRadiographyReceptors, NotchSomitesIntracellular Signaling Peptides and ProteinsNrarp protein, mouseProteinsReceptors, Notch

Identifiers

PMID21795391
PMCPMC3172277
OpenAlexW2122498044

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.