Evidence map›Paper›PMID 21792633›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011

Use of Mutant-Assisted Gene Identification and Characterization (MAGIC) to identify novel genetic loci that modify the maize hypersensitive response.

Vijay Chaikam, Adisu Negeri, Rahul Dhawan, Bala Puchaka, Jiabing Ji, Satya Chintamanani, Emma W Gachomo, Allen Zillmer, Timothy Doran, Cliff Weil and 2 more

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

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  5. Identification of modifiers of the plant height in wheat using an induced dwarf mutant controlled byPhysiology and molecular biology of plants : an international journal of functional plant biology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 2 countries.

Vijay ChaikamDepartment of Agronomy, Purdue University, West Lafayette, IN 47907, USA.
Adisu Negeri
Rahul Dhawan
Bala Puchaka
Jiabing Ji
Satya Chintamanani
Emma W Gachomo
Allen Zillmer
Timothy Doran
Cliff Weil
Peter Balint-Kurti
Guri Johal
Purdue University West Lafayette · USDavid H. Murdock Research Institute · USMonsanto (United States) · USNorth Carolina State University · USNorth Central State College · USSyngenta (Switzerland) · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The partially dominant, autoactive maize disease resistance gene Rp1-D21 causes hypersensitive response (HR) lesions to form spontaneously on leaves and stems in the absence of pathogen recognition. The maize nested association mapping (NAM) population consists of 25 200-line subpopulations each derived from a cross between the maize line B73 and one of 25 diverse inbred lines. By crossing a line carrying the Rp1-D21 gene with lines from three of these subpopulations and assessing the F(1) progeny, we were able to map several novel loci that modify the maize HR, using both single-population quantitative trait locus (QTL) and joint analysis of all three populations. Joint analysis detected QTL in greater number and with greater confidence and precision than did single population analysis. In particular, QTL were detected in bins 1.02, 4.04, 9.03, and 10.03. We have previously termed this technique, in which a mutant phenotype is used as a "reporter" for a trait of interest, Mutant-Assisted Gene Identification and Characterization (MAGIC).

Indexed as

Genes, PlantQuantitative Trait LociCarrier ProteinsChromosome MappingChromosomes, PlantCrosses, GeneticDisease ResistanceGenetic Association StudiesGenetic VariationIntracellular Signaling Peptides and ProteinsMutationPhenotypePlant DiseasesPlant ProteinsZea maysCarrier ProteinsIntracellular Signaling Peptides and ProteinsPlant ProteinsRp1-D protein, Zea mays

Identifiers

PMID21792633
OpenAlexW2030310185

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.