Evidence map›Paper›PMID 21791550›Full record

SynthesisHuman molecular genetics2011

Common variants at VRK2 and TCF4 conferring risk of schizophrenia.

Stacy Steinberg, Simone de Jong, Irish Schizophrenia Genomics Consortium, Ole A Andreassen, Thomas Werge, Anders D Børglum, Ole Mors, Preben B Mortensen, Omar Gustafsson, Javier Costas and 75 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Human molecular genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers, 9 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed, 9 pooled it
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 9 syntheses or guidelines pooled it, 216 citations in OpenAlex.

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  10. Article
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  12. Mice lacking two alleles of the schizophrenia risk geneFrontiers in cellular neuroscience · 2026
    Article
  13. Article
  14. Association of theAmerican journal of translational research · 2023
    Article
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40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

85 authors at 20 institutions in 14 countries.

Stacy SteinbergdeCODE Genetics, IS-101 Reykjavik, Iceland.
Simone de Jong
Irish Schizophrenia Genomics Consortium
Ole A Andreassen
Thomas Werge
Anders D Børglum
Ole Mors
Preben B Mortensen
Omar Gustafsson
Javier Costas
Olli P H Pietiläinen
Ditte Demontis
Sergi Papiol
Johanna Huttenlocher
Manuel Mattheisen
René Breuer
Evangelos Vassos
Ina Giegling
Gillian Fraser
Nicholas Walker
Annamari Tuulio-Henriksson
Jaana Suvisaari
Jouko Lönnqvist
Tiina Paunio
Ingrid Agartz
Ingrid Melle
Srdjan Djurovic
Eric Strengman
GROUP
Gesche Jürgens
Birte Glenthøj
Lars Terenius
David M Hougaard
Torben Ørntoft
Carsten Wiuf
Michael Didriksen
Mads V Hollegaard
Merete Nordentoft
Ruud van Winkel
Gunter Kenis
Lilia Abramova
Vasily Kaleda
Manuel Arrojo
Julio Sanjuán
Celso Arango
Swetlana Sperling
Moritz Rossner
Michele Ribolsi
Valentina Magni
Alberto Siracusano
Claus Christiansen
Lambertus A Kiemeney
Jan Veldink
Leonard van den Berg
Andres Ingason
Pierandrea Muglia
Robin Murray
Markus M Nöthen
Engilbert Sigurdsson
Hannes Petursson
Unnur Thorsteinsdottir
Augustine Kong
I Alex Rubino
Marc De Hert
János M Réthelyi
István Bitter
Erik G Jönsson
Vera Golimbet
Angel Carracedo
Hannelore Ehrenreich
Nick Craddock
Michael J Owen
Michael C O'Donovan
Wellcome Trust Case Control Consortium 2
Mirella Ruggeri
Sarah Tosato
Leena Peltonen
Roel A Ophoff
David A Collier
David St Clair
Marcella Rietschel
Sven Cichon
Hreinn Stefansson
Dan Rujescu
Kari Stefansson
deCODE Genetics (Iceland) · ISUniversity Medical Center Utrecht · NLFinnish Institute for Health and Welfare · FIUniversity of Rome Tor Vergata · ITAarhus University Hospital · DKCardiff University · GBCopenhagen University Hospital · DKMental Health Research Center of Russian Academy of Medical Sciences · RUNanoscale Microscopy and Molecular Physiology of the Brain Cluster of Excellence 171 — DFG Research Center 103 · DEUniversity of Oslo · NOAarhus University · DKCentral Institute of Mental Health · DEHologic (Germany) · DEKarolinska Institutet · SELudwig-Maximilians-Universität München · DESemmelweis University · HUStatens Serum Institut · DKUniversity of Bonn · DEUniversity of Helsinki · FIUniversity of Verona · IT

Funding

High-density Genome-wide Association Study SchizophreniaR01MH078075 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI OPHOFF, ROEL A · 2006 to 2009
$3.7M
Genetics of Gene Expression and Gene Mapping for Amytrophic Lateral SclerosisR01NS058980 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI OPHOFF, ROEL A · 2008 to 2012
$1.6M
Replication of Schizophrenia Associations in CATIER01MH074027 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2006 to 2007
$715k
Pop-Track NIMHZ01MH900001 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI POP-TRACK, IC · 2002 to 2003
–
Medical Research Council G0800509NIMH NIH HHS MH074027NIMH NIH HHS N01 MH900001NIMH NIH HHS R01 MH074027NIMH NIH HHS R01 MH078075NINDS NIH HHS R01 NS058980Wellcome Trust 083948/Z/07/Z
6 · The paper itself

Abstract

Common sequence variants have recently joined rare structural polymorphisms as genetic factors with strong evidence for association with schizophrenia. Here we extend our previous genome-wide association study and meta-analysis (totalling 7 946 cases and 19 036 controls) by examining an expanded set of variants using an enlarged follow-up sample (up to 10 260 cases and 23 500 controls). In addition to previously reported alleles in the major histocompatibility complex region, near neurogranin (NRGN) and in an intron of transcription factor 4 (TCF4), we find two novel variants showing genome-wide significant association: rs2312147[C], upstream of vaccinia-related kinase 2 (VRK2) [odds ratio (OR) = 1.09, P = 1.9 × 10(-9)] and rs4309482[A], between coiled-coiled domain containing 68 (CCDC68) and TCF4, about 400 kb from the previously described risk allele, but not accounted for by its association (OR = 1.09, P = 7.8 × 10(-9)).

Indexed as

Polymorphism, Single NucleotideAllelesBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansProtein Serine-Threonine KinasesRiskSchizophreniaTranscription Factor 4Transcription FactorsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsProtein Serine-Threonine KinasesTCF4 protein, humanTranscription Factor 4Transcription FactorsVRK2 protein, human

Identifiers

PMID21791550
PMCPMC3298077
OpenAlexW2140280664

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.