Evidence map›Paper›PMID 21789183›Full record

ArticlePloS one2011

Catalytic and non-catalytic roles for the mono-ADP-ribosyltransferase Arr in the mycobacterial DNA damage response.

Christina L Stallings, Linda Chu, Lucy X Li, Michael S Glickman

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. ADP-ribosylation systems in bacteria and viruses.Computational and structural biotechnology journal · 2021
    Review
  5. Article
  6. Article
  7. Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Christina L StallingsDepartment of Molecular Microbiology Washington University School of Medicine, St. Louis, Missouri, United States of America.
Linda Chu
Lucy X Li
Michael S Glickman
Kettering University · USResearch Experiences for Undergraduates · USWashington University in St. Louis · US

Funding

Novel pathway of DNA inter-strand crosslink repair in mycobacteriaR01AI064693 · NIAID · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Michael S Glickman, Stewart H Shuman · 2005 to 2026
$11.1M
Mediation of DNA Repair in Mycobacteria by CarD Proteins and ADP-RIbosylationF32AI075805 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI STALLINGS, CHRISTINA LEIGH · 2007 to 2009
$148k
NIAID NIH HHS AI064693NIAID NIH HHS AI075805NIAID NIH HHS F32 AI075805NIAID NIH HHS R01 AI064693
6 · The paper itself

Abstract

Recent evidence indicates that the mycobacterial response to DNA double strand breaks (DSBs) differs substantially from previously characterized bacteria. These differences include the use of three DSB repair pathways (HR, NHEJ, SSA), and the CarD pathway, which integrates DNA damage with transcription. Here we identify a role for the mono-ADP-ribosyltransferase Arr in the mycobacterial DNA damage response. Arr is transcriptionally induced following DNA damage and cellular stress. Although Arr is not required for induction of a core set of DNA repair genes, Arr is necessary for suppression of a set of ribosomal protein genes and rRNA during DNA damage, placing Arr in a similar pathway as CarD. Surprisingly, the catalytic activity of Arr is not required for this function, as catalytically inactive Arr was still able to suppress ribosomal protein and rRNA expression during DNA damage. In contrast, Arr substrate binding and catalytic activities were required for regulation of a small subset of other DNA damage responsive genes, indicating that Arr has both catalytic and noncatalytic roles in the DNA damage response. Our findings establish an endogenous cellular function for a mono-ADP-ribosyltransferase apart from its role in mediating Rifampin resistance.

Indexed as

BiocatalysisDNA DamageADP Ribose TransferasesBacterial ProteinsDNA Breaks, Double-StrandedDNA-Directed RNA PolymerasesDNA RepairDrug Resistance, BacterialGene Expression Regulation, BacterialGenes, BacterialMycobacterium smegmatisOligonucleotide Array Sequence AnalysisProtein BindingRibosomal ProteinsRifampinRNA, RibosomalADP Ribose TransferasesBacterial ProteinsDNA-Directed RNA PolymerasesRibosomal ProteinsRifampinRNA, Ribosomal

Identifiers

PMID21789183
PMCPMC3138739
OpenAlexW2171297740

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.