Evidence map›Paper›PMID 21778195›Full record

ArticleThe Journal of antimicrobial chemotherapy2011

Characteristics of embB mutations in multidrug-resistant Mycobacterium tuberculosis isolates in Henan, China.

Dawei Shi, Liang Li, Yuling Zhao, Qiong Jia, Hui Li, Christopher Coulter, Qi Jin, Guofeng Zhu

Abstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Mutations inAntibiotics (Basel, Switzerland) · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Detecting Ethambutol Resistance inFrontiers in microbiology · 2020
    Article
  8. Rapid Detection of Ethambutol-ResistantInfection and drug resistance · 2020
    Article
  9. Frequency of Codon 306 Mutations inInternational journal of preventive medicine · 2020
    Review
  10. Characterization of the most commonInfection and drug resistance · 2019
    Article
  11. Review
  12. Article
  13. Mutations withinAntimicrobial agents and chemotherapy · 2018
    Article
  14. Molecular Targets Related Drug Resistance Mechanisms in MDR-, XDR-, and TDR-Frontiers in cellular and infection microbiology · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Dawei ShiState Key Laboratory for Molecular Virology and Genetic Engineering, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100176, China.
Liang Li
Yuling Zhao
Qiong Jia
Hui Li
Christopher Coulter
Qi Jin
Guofeng Zhu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTo determine the association between embB mutations and drug resistance, and to further investigate the mechanism of embB mutations involved in the development of ethambutol and multidrug resistance in Mycobacterium tuberculosis.

methodsOne hundred and thirty-eight multidrug-resistant clinical M. tuberculosis isolates, including 86 ethambutol-resistant and 52 ethambutol-susceptible strains, were analysed to characterize mutations within the entire coding region of the embB gene. Moreover, a two-step genotyping was performed to identify the genetic lineage.

resultsIn total, 27 embB mutation types were detected in 19 distinct codons. Though a strong association was observed between embB mutations and ethambutol resistance, 19.2% of embB306 mutants and 11.5% of embB406 or embB497 mutants were ethambutol susceptible. Among 39 ethambutol-resistant strains without embB306 mutations, 51.3% harboured mutations at codons 406 or 497. Particularly, three pairs of isolates with identical embB mutations and genotyping features were identified with variant ethambutol susceptibility. Among 77 isoniazid, rifampicin, streptomycin and ethambutol quadruple drug-resistant isolates, 89.6% carried embB mutations and 83.1% could be identified by detecting 10 embB mutations.

conclusionsOur results suggest embB mutations alone are not sufficient for the development of full resistance to ethambutol in M. tuberculosis and mutations other than embB are also needed. Our study confirms the importance of mutations at embB406 and embB497 as hotspots, in addition to embB306, for detecting ethambutol resistance. Ten selected mutations of embB, covered by a short PCR product, can be used as candidate markers for the prediction of quadruple resistance to isoniazid, rifampicin, streptomycin and ethambutol.

Indexed as

Antitubercular AgentsBase SequenceChinaDNA, BacterialDrug Resistance, Multiple, BacterialEthambutolGenetic MarkersGenotypeHumansIsoniazidMicrobial Sensitivity TestsMutationMycobacterium tuberculosisPentosyltransferasesRifampinSequence Analysis, DNAAntitubercular AgentsDNA, BacterialEmbB protein, Mycobacterium tuberculosisEthambutolGenetic MarkersIsoniazidPentosyltransferasesRifampinStreptomycin

Identifiers

PMID21778195
PMCPMC3172039

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.