Evidence map›Paper›PMID 21775680›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2011

An insertion mutant in DQA1*0501 restores susceptibility to HLA-DM: implications for disease associations.

Tieying Hou, Henriette Macmillan, Zhenjun Chen, Catherine L Keech, Xi Jin, John Sidney, Michael Strohman, Taejin Yoon, Elizabeth D Mellins

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Tuning DO:DM Ratios Modulates MHC Class II Immunopeptidomes.Molecular & cellular proteomics : MCP · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. HLA-DO Modulates the Diversity of the MHC-II Self-peptidome.Molecular & cellular proteomics : MCP · 2019
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Tieying HouDepartment of Pediatrics, Program in Immunology, Stanford University, Stanford, CA 94305, USA.
Henriette Macmillan
Zhenjun Chen
Catherine L Keech
Xi Jin
John Sidney
Michael Strohman
Taejin Yoon
Elizabeth D Mellins
Stanford University · USLa Jolla Institute for Immunology · USUniversity of Melbourne · AUVictoria University · AU

Funding

MOLECULAR &CELLULAR IMMUNOBIOLOGYT32AI007290 · NIAID · STANFORD UNIVERSITY · PI Sean Curtis Bendall, Olivia M Martinez · 1985 to 2026
$27.0M
MHC association in autoimmune arthritisR21AI075253 · NIAID · STANFORD UNIVERSITY · PI MELLINS, ELIZABETH D · 2008 to 2010
$486k
Mechanism of MHC Association with Type 1 DiabetesR21DK079163 · NIDDK · STANFORD UNIVERSITY · PI MELLINS, ELIZABETH D · 2008 to 2009
$435k
Characterization of HLA-DQ2 and HLA-DM interactionF32AI089080 · NIAID · STANFORD UNIVERSITY · PI HOU, TIEYING · 2010 to 2011
$99k
PROCESSING OF ANTIGENS FOR HLA RESTRICTED PRESENTATIONR01AI028809 · NIAID · STANFORD UNIVERSITY · PI MELLINS, ELIZABETH D · 1995 to 1999
–
NIAID NIH HHS 1F32AI089080-01NIAID NIH HHS 5 T32 AI07290-24NIAID NIH HHS 5T32AI07290-24NIAID NIH HHS 5 T32 AI07290-26NIAID NIH HHS F32 AI089080NIAID NIH HHS R01 AI028809NIAID NIH HHS R21 AI075253NIAID NIH HHS T32 AI007290NIDDK NIH HHS 5R21DK079163-02NIDDK NIH HHS R21 DK079163
6 · The paper itself

Abstract

HLA-DM (DM) catalyzes CLIP release, stabilizes MHC class II molecules, and edits the peptide repertoire presented by class II. Impaired DM function may have profound effects on Ag presentation events in the thymus and periphery that are critical for maintenance of self-tolerance. The associations of the HLA-DQ2 (DQ2) allele with celiac disease and type 1 diabetes mellitus have been appreciated for a long time. The explanation for these associations, however, remains unknown. We previously found that DQ2 is a poor substrate for DM. In this study, to further characterize DQ2-DM interaction, we introduced point mutations into DQ2 on the proposed DQ2-DM interface to restore the sensitivity of DQ2 to DM. The effects of mutations were investigated by measuring the peptide dissociation and exchange rate in vitro, CLIP and DQ2 expression on the cell surface, and the presentation of α-II-gliadin epitope (residues 62-70) to murine, DQ2-restricted T cell hybridomas. We found that the three α-chain mutations (α+53G, α+53R, or αY22F) decreased the intrinsic stability of peptide-class II complex. More interestingly, the α+53G mutant restored DQ2 sensitivity to DM, likely due to improved interaction with DM. Our data also suggest that α-II-gliadin 62-70 is a DM-suppressed epitope. The DQ2 resistance to DM changes the fate of this peptide from a cryptic to an immunodominant epitope. Our findings elucidate the structural basis for reduced DQ2-DM interaction and have implications for mechanisms underlying disease associations of DQ2.

Indexed as

MutationAmino Acid SequenceAnimalsAntigen PresentationCeliac DiseaseCell SeparationFlow CytometryGliadinHLA-D AntigensHLA-DQ alpha-ChainsHLA-DQ AntigensHybridomasLymphocyte ActivationMiceMolecular Sequence DataProtein Structure, SecondaryGliadinHLA-D AntigensHLA-DM antigensHLA-DQA1 antigenHLA-DQ alpha-ChainsHLA-DQ Antigens

Identifiers

PMID21775680
PMCPMC3159820
OpenAlexW2118776631

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.