Evidence map›Paper›PMID 21771815›Full record

ArticleDevelopment (Cambridge, England)2011

Notch and Ras promote sequential steps of excretory tube development in C. elegans.

Ishmail Abdus-Saboor, Vincent P Mancuso, John I Murray, Katherine Palozola, Carolyn Norris, David H Hall, Kelly Howell, Kai Huang, Meera V Sundaram

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.3field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Epithelial morphogenesis, tubulogenesis and forces in organogenesis.Current topics in developmental biology · 2021
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Time to make the doughnuts: Building and shaping seamless tubes.Seminars in cell & developmental biology · 2017
    Review
  17. Review
  18. Article
  19. Auto-fusion and the shaping of neurons and tubes.Seminars in cell & developmental biology · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Ishmail Abdus-SaboorDepartment of Genetics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Vincent P Mancuso
John I Murray
Katherine Palozola
Carolyn Norris
David H Hall
Kelly Howell
Kai Huang
Meera V Sundaram
University of Pennsylvania · USAlbert Einstein College of Medicine · USJohns Hopkins University · US

Funding

Center for C elegans AnatomyR24OD010943 · OD · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DAVID H. HALL, Nathan Schroeder · 2012 to 2026
$9.6M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008216 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI EPSTEIN, DOUGLAS J · 1987 to 2023
$8.3M
VANADIUM INTERACTION STUDIES IN RELATION TO THE INHIBITION OF NA+-K+-ATPASES06GM008216 · NIGMS · UNIVERSITY OF PUERTO RICO AT HUMACAO · PI ORTIZ-MARCIALES, MARGARITA · 1989 to 2010
$8.0M
CENTER FOR CAENORHABDITIS ELGANS ANATOMYR24RR012596 · NCRR · YESHIVA UNIVERSITY · PI HALL, DAVID H. · 1998 to 2011
$8.0M
Ras Signaling and Tubulogenesis in the C. elegans Excretory (renal) SystemR01GM058540 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI SUNDARAM, MEERA · 2000 to 2019
$5.3M
Dissecting the Regulation of Gene Expression during C. elegans EmbryogenesisR00GM083145 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI MURRAY, JOHN ISAAC · 2010 to 2012
$742k
Dissecting the Regulation of Gene Expression during C. elegans EmbryogenesisK99GM083145 · NIGMS · UNIVERSITY OF WASHINGTON · PI MURRAY, JOHN ISAAC · 2008 to 2009
$175k
NCRR NIH HHS R24 RR012596NIGMS NIH HHS GM083145NIGMS NIH HHS GM58540NIGMS NIH HHS K99 GM083145NIGMS NIH HHS R00 GM083145NIGMS NIH HHS R01 GM058540NIGMS NIH HHS S06 GM008216NIGMS NIH HHS T32 GM008216NIH HHS R24 OD010943
6 · The paper itself

Abstract

Receptor tyrosine kinases and Notch are crucial for tube formation and branching morphogenesis in many systems, but the specific cellular processes that require signaling are poorly understood. Here we describe sequential roles for Notch and Epidermal growth factor (EGF)-Ras-ERK signaling in the development of epithelial tube cells in the C. elegans excretory (renal-like) organ. This simple organ consists of three tandemly connected unicellular tubes: the excretory canal cell, duct and G1 pore. lin-12 and glp-1/Notch are required to generate the canal cell, which is a source of LIN-3/EGF ligand and physically attaches to the duct during de novo epithelialization and tubulogenesis. Canal cell asymmetry and let-60/Ras signaling influence which of two equivalent precursors will attach to the canal cell. Ras then specifies duct identity, inducing auto-fusion and a permanent epithelial character; the remaining precursor becomes the G1 pore, which eventually loses epithelial character and withdraws from the organ to become a neuroblast. Ras continues to promote subsequent aspects of duct morphogenesis and differentiation, and acts primarily through Raf-ERK and the transcriptional effectors LIN-1/Ets and EOR-1. These results reveal multiple genetically separable roles for Ras signaling in tube development, as well as similarities to Ras-mediated control of branching morphogenesis in more complex organs, including the mammalian kidney. The relative simplicity of the excretory system makes it an attractive model for addressing basic questions about how cells gain or lose epithelial character and organize into tubular networks.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell LineageGene Expression Regulation, DevelopmentalMAP Kinase Signaling Systemras ProteinsReceptors, NotchSOS1 ProteinCaenorhabditis elegans Proteinslet-60 protein, C elegansras ProteinsReceptors, NotchSOS1 Protein

Identifiers

PMID21771815
PMCPMC3143567
OpenAlexW2110185992

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.