Evidence map›Paper›PMID 21768053›Full record

ArticleEnvironmental health perspectives2011

Seasonal variation in TP53 R249S-mutated serum DNA with aflatoxin exposure and hepatitis B virus infection.

Stéphanie Villar, Emilie Le Roux-Goglin, Doriane A Gouas, Amelie Plymoth, Gilles Ferro, Mathieu Boniol, Myriam Lereau, Ebrima Bah, Andrew J Hall, Christopher P Wild and 7 more

Open access · diamondAbstract read
In one paragraph

Article in Environmental health perspectives, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 39 citations in OpenAlex.

  1. Aflatoxin exposure and health impacts: global burden and advances in detection technologies.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2026
    Review
  2. Review
  3. Can We Interpret Analyses of Etiologic Heterogeneity When Molecular Markers Are Used to Classify Tumors?Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2026
    Article
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  9. Preoperative evaluation of microvascular invasion with circulating tumour DNA in operable hepatocellular carcinoma.Liver international : official journal of the International Association for the Study of the Liver · 2020
    Article
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  20. Seasonality of hepatitis: a review update.Journal of family medicine and primary care
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 6 countries.

Stéphanie VillarMolecular Carcinogenesis Group, International Agency for Research on Cancer, Lyon, France.
Emilie Le Roux-Goglin
Doriane A Gouas
Amelie Plymoth
Gilles Ferro
Mathieu Boniol
Myriam Lereau
Ebrima Bah
Andrew J Hall
Christopher P Wild
Maimuna Mendy
Helene Norder
Marianne van der Sande
Hilton Whittle
Marlin D Friesen
John D Groopman
Pierre Hainaut
Centre international de recherche sur le cancer · FRMRC Unit the Gambia · GMJohns Hopkins University · USKarolinska Institutet · SELondon School of Hygiene & Tropical Medicine · GBNational Institute for Public Health and the Environment · NLSwedish Institute · SE

Funding

Validation and Application of Risk, Biomarkers in Human StudiesP01ES006052 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI GROOPMAN, JOHN D · 1993 to 2012
$22.6M
Medical Research Council MC_U190071516NIEHS NIH HHS ES 06052NIEHS NIH HHS P01 ES006052
6 · The paper itself

Abstract

backgroundChronic hepatitis B virus (HBV) infection and dietary aflatoxin B1 (AFB1) exposure are etiological factors for hepatocellular carcinoma (HCC) in countries with hot, humid climates. HCC often harbors a TP53 (tumor protein p53) mutation at codon 249 (R249S). In chronic carriers, 1762T/1764A mutations in the HBV X gene are associated with increased HCC risk. Both mutations have been detected in circulating cell-free DNA (CFDNA) from asymptomatic HBV carriers.

objectiveWe evaluated seasonal variation in R249S and HBV in relation to AFB1 exposure.

methodsR249S was quantitated by mass spectrometry in CFDNA in a cross-sectional survey of 473 asymptomatic subjects (237 HBV carriers and 236 noncarriers) recruited in three villages in the Gambia over a 10-month period. 1762T/1764A HBV mutations were detected by quantitative polymerase chain reaction. In addition, the HBV S gene was sequenced in 99 subjects positive for HBV surface antigen (HBsAg).

resultsWe observed a seasonal variation of serum R249S levels. Positivity for R249S and average concentration were significantly higher in HBsAg-positive subjects surveyed during April-July (61%; 5,690 ± 11,300 R249S copies/mL serum) than in those surveyed October-March [32% and 480 ± 1,030 copies/mL serum (odds ratio = 3.59; 95% confidence interval: 2.05, 6.30; p < 0.001)]. Positivity for HBV e antigen (HBeAg) (a marker of HBV replication) and viral DNA load also varied seasonally, with 15-30% of subjects surveyed between April and June HBeAg positive, compared with < 10% surveyed during other months. We detected 1762T/1764A mutations in 8% of carriers, half of whom were positive for R249S. We found HBV genotype E in 95 of 99 HBsAg-positive subjects.

conclusionR249S is detectable in CFDNA of asymptomatic subjects. Evidence of temporal and quantitative variations suggests an interaction among AFB1 exposure, HBV positivity, and replication on TP53 mutation formation or persistence.

Indexed as

AdultAflatoxinsAgedCase-Control StudiesCross-Sectional StudiesDNA, ViralFemaleGambiaHepatitis B, ChronicHepatitis B virusHumansInfantMaleMiddle AgedMutationPolymerase Chain ReactionAflatoxinsDNA, ViralTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID21768053
PMCPMC3226502
OpenAlexW1978905923

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.