Evidence map›Paper›PMID 21767634›Full record

ReviewNeurotoxicology and teratology

The negative side of retinoic acid receptors.

Elwood Linney, Susan Donerly, Laura Mackey, Betsy Dobbs-McAuliffe

Open access · greenAbstract readReview
In one paragraph

Review in Neurotoxicology and teratology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Expression and retinoic acid regulation of the zebrafish nr2f orphan nuclear receptor genes.Developmental dynamics : an official publication of the American Association of Anatomists · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Elwood LinneyDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC 27710, United States. elwood.linney@duke.edu
Susan Donerly
Laura Mackey
Betsy Dobbs-McAuliffe
Duke Medical Center · USCentral Connecticut State University · USDuke University Hospital · US

Funding

CENTER FOR INVIRONMENATL GENOMICSU19ES011375 · NIEHS · DUKE UNIVERSITY · PI LINNEY, ELWOOD ALBERT · 2001 to 2006
$8.8M
Subsequent effects of manipulating embryonic neuronal activityR01ES016554 · NIEHS · DUKE UNIVERSITY · PI LINNEY, ELWOOD ALBERT · 2009 to 2010
$753k
NIEHS NIH HHS ES011375NIEHS NIH HHS ES016554NIEHS NIH HHS R01 ES016554NIEHS NIH HHS U19 ES011375
6 · The paper itself

Abstract

This is a review of research that supports a hypothesis regarding early restriction of gene expression in the vertebrate embryo. We hypothesize that vertebrate retinoic acid receptors (RARs for several vertebrates but rars for zebrafish) are part of an embryonic, epigenetic switch whose default position, at the time of fertilization is "OFF". This is due to the assemblage of a rar-corepressor-histone deacetylase complex on retinoic acid response elements (RAREs) in regulatory regions of a subset of genes. In addition, selective and precise allocation of retinoic acid during early development through the interaction of Phase I enzymes throws the switch "ON" in a predictable, developmental manner. We are proposing that this is a basic, early embryonic switch that can cause the initiation of cascades of gene expression that are responsible for at least some early, diversification of cell phenotypes. Dehydrogenases and a subset of cytochrome p450 genes (cyp26a1, cyp26b1, and cyp26c1) play the major role in providing the retinoic acid and limiting its access. We also suggest that this mechanism may be playing a significant role in the repression of genes in undifferentiated stem cells.

Indexed as

AnimalsEmbryo, NonmammalianEpigenesis, GeneticGene Expression Regulation, DevelopmentalReceptors, Retinoic AcidResponse ElementsTretinoinZebrafishReceptors, Retinoic AcidTretinoin

Identifiers

PMID21767634
PMCPMC3208776
OpenAlexW2078435828

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.