Evidence map›Paper›PMID 21767497›Full record

ArticleBiophysical journal2011

Physical properties of polymorphic yeast prion amyloid fibers.

Carlos E Castro, Jijun Dong, Mary C Boyce, Susan Lindquist, Matthew J Lang

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 0 citations in OpenAlex.

  1. Article
  2. Single-molecule investigations of single-chain cellulose biosynthesis.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Orientation of aromatic residues in amyloid cores: structural insights into prion fiber diversity.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  10. Prions in yeast.Genetics · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Carlos E CastroDepartment of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Jijun Dong
Mary C Boyce
Susan Lindquist
Matthew J Lang
Massachusetts Institute of Technology · USWhitehead Institute for Biomedical Research · USVanderbilt University · US

Funding

THE FUNCTION OF HEAT SHOCK RESPONSE IN DROSOPHILAR01GM025874 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI WHITESELL, LUKE J · 1985 to 2016
$4.7M
CHAPERONE PROTEIN AND PROTEIN CONFORMATIONAL SWITCHESR37GM025874 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI LINDQUIST, SUSAN L. · 1997 to 2006
$2.7M
Molecular, Cell and Tissue Biomechanics Training GrantT32EB006348 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KAMM, ROGER D · 2006 to 2010
$1.6M
Development of a Fluorescence-Based Force Sensor MoleculeR21CA133576 · NCI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI LANG, MATTHEW J. · 2009 to 2010
$414k
Howard Hughes Medical InstituteNCI NIH HHS R21 CA133576NCI NIH HHS R21CA133576NIBIB NIH HHS T32 EB006348NIBIB NIH HHS T32EB006348NIGMS NIH HHS GM025874NIGMS NIH HHS R01 GM025874NIGMS NIH HHS R37 GM025874
6 · The paper itself

Abstract

Amyloid fibers play important roles in many human diseases and natural biological processes and have immense potential as novel nanomaterials. We explore the physical properties of polymorphic amyloid fibers formed by yeast prion protein Sup35. Amyloid fibers that conferred distinct prion phenotypes ([PSI(+)]), strong (S) versus weak (W) nonsense suppression, displayed different physical properties. Both S[PSI(+)] and W[PSI(+)] fibers contained structural inhomogeneities, specifically local regions of static curvature in S[PSI(+)] fibers and kinks and self-cross-linking in W[PSI(+)] fibers. Force-extension experiments with optical tweezers revealed persistence lengths of 1.5 μm and 3.3 μm and axial stiffness of 5600 pN and 9100 pN for S[PSI(+)] and W[PSI(+)] fibers, respectively. Thermal fluctuation analysis confirmed the twofold difference in persistence length between S[PSI(+)] and W[PSI(+)] fibers and revealed a torsional stiffness of kinks and cross-links of ~100-200 pN·nm/rad.

Indexed as

Biophysical PhenomenaAmyloidElastic ModulusFluorescenceFluorescent DyesHumansNanostructuresPrionsSaccharomyces cerevisiaeTemperatureTorsion, MechanicalAmyloidFluorescent DyesPrions

Identifiers

PMID21767497
PMCPMC3136792
OpenAlexW1521570006

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.