Evidence map›Paper›PMID 21765815›Full record

ArticlePLoS genetics2011

Foxp2 regulates gene networks implicated in neurite outgrowth in the developing brain.

Sonja C Vernes, Peter L Oliver, Elizabeth Spiteri, Helen E Lockstone, Rathi Puliyadi, Jennifer M Taylor, Joses Ho, Cedric Mombereau, Ariel Brewer, Ernesto Lowy and 9 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 165 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
165citing papers in PubMed, 3 pooled it
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

165 citing papers in PubMed, 3 syntheses or guidelines pooled it, 289 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Language impairment and dyslexia genes influence language skills in children with autism spectrum disorders.Autism research : official journal of the International Society for Autism Research · 2015
    Pooled it
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  8. Fine mapping of PTSD GWAS reveals a role for amygdalabioRxiv : the preprint server for biology · 2026
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  19. Article
  20. Tubular FoxP2 and Kidney Fibrosis.Journal of the American Society of Nephrology : JASN · 2025
    Article

105 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 4 countries.

Sonja C VernesWellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.
Peter L Oliver
Elizabeth Spiteri
Helen E Lockstone
Rathi Puliyadi
Jennifer M Taylor
Joses Ho
Cedric Mombereau
Ariel Brewer
Ernesto Lowy
Jérôme Nicod
Matthias Groszer
Dilair Baban
Natasha Sahgal
Jean-Baptiste Cazier
Jiannis Ragoussis
Kay E Davies
Daniel H Geschwind
Simon E Fisher
Centre for Human Genetics · GBUniversity of Oxford · GBUniversity of California, Los Angeles · USInserm · FRInstitut du Fer à Moulin · FRMax Planck Institute for Psycholinguistics · NLMedical Research Council · GB

Funding

UCLA Medical Genetics Training ProgramT32GM008243 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Julian Martinez-Agosto, STANLEY F. NELSON · 1987 to 2026
$6.8M
Identification and Characterization of Asymmetrically-Expressed GenesR37MH060233 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GESCHWIND, DANIEL H · 2006 to 2014
$5.3M
Identification of targets of FoxP2 in the brainR21MH075028 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GESCHWIND, DANIEL H · 2005 to 2006
$336k
Medical Research Council MC_U137761449NIGMS NIH HHS T32 GM008243NIGMS NIH HHS T32GM008243NIMH NIH HHS 5R21MH075028NIMH NIH HHS R21 MH075028NIMH NIH HHS R37 MH060233Wellcome TrustWellcome Trust 075491Wellcome Trust 075491/Z/04Wellcome Trust 080971
6 · The paper itself

Abstract

Forkhead-box protein P2 is a transcription factor that has been associated with intriguing aspects of cognitive function in humans, non-human mammals, and song-learning birds. Heterozygous mutations of the human FOXP2 gene cause a monogenic speech and language disorder. Reduced functional dosage of the mouse version (Foxp2) causes deficient cortico-striatal synaptic plasticity and impairs motor-skill learning. Moreover, the songbird orthologue appears critically important for vocal learning. Across diverse vertebrate species, this well-conserved transcription factor is highly expressed in the developing and adult central nervous system. Very little is known about the mechanisms regulated by Foxp2 during brain development. We used an integrated functional genomics strategy to robustly define Foxp2-dependent pathways, both direct and indirect targets, in the embryonic brain. Specifically, we performed genome-wide in vivo ChIP-chip screens for Foxp2-binding and thereby identified a set of 264 high-confidence neural targets under strict, empirically derived significance thresholds. The findings, coupled to expression profiling and in situ hybridization of brain tissue from wild-type and mutant mouse embryos, strongly highlighted gene networks linked to neurite development. We followed up our genomics data with functional experiments, showing that Foxp2 impacts on neurite outgrowth in primary neurons and in neuronal cell models. Our data indicate that Foxp2 modulates neuronal network formation, by directly and indirectly regulating mRNAs involved in the development and plasticity of neuronal connections.

Indexed as

Gene Regulatory NetworksAnimalsBrainCell Line, TumorChromatin ImmunoprecipitationCorpus StriatumForkhead Transcription FactorsGene Expression ProfilingGene Expression Regulation, DevelopmentalMiceMice, Inbred C57BLModels, BiologicalMutationNeuritesOligonucleotide Array Sequence AnalysisPrimary Cell CultureForkhead Transcription FactorsFoxp2 protein, mouseRepressor ProteinsRNA, Messenger

Identifiers

PMID21765815
PMCPMC3131290
OpenAlexW2010016215

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.