Evidence map›Paper›PMID 21764969›Full record

ArticleApplied and environmental microbiology2011

Novel virulent and broad-host-range Erwinia amylovora bacteriophages reveal a high degree of mosaicism and a relationship to Enterobacteriaceae phages.

Yannick Born, Lars Fieseler, Janine Marazzi, Rudi Lurz, Brion Duffy, Martin J Loessner

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 114 citations in OpenAlex.

  1. Mutation of Eamy_RS26425,Applied and environmental microbiology · 2026
    Article
  2. Frontiers in plant science · 2026
    Review
  3. Article
  4. Efficacy ofMicrobiology spectrum · 2025
    Article
  5. Article
  6. Whole genome sequences of eightMicrobiology resource announcements · 2025
    Article
  7. Review
  8. Review
  9. Journal of virology · 2024
    Article
  10. Article
  11. First EuropeanBiology · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Three Phages One Host: Isolation and Characterization ofInternational journal of molecular sciences · 2023
    Article
  16. Article
  17. Article
  18. ICTV Virus Taxonomy Profile:The Journal of general virology · 2022
    Article
  19. NovelMicroorganisms · 2022
    Article
  20. Spontaneous Resistance ofFrontiers in microbiology · 2022
    Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Yannick BornAgroscope Changins-Wädenswil ACW, Swiss National Competence Center for Fire Blight, 8820 Wädenswil, Switzerland.
Lars Fieseler
Janine Marazzi
Rudi Lurz
Brion Duffy
Martin J Loessner
ETH Zurich · CHAgroscope · CHMax Planck Institute for Molecular Genetics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A diverse set of 24 novel phages infecting the fire blight pathogen Erwinia amylovora was isolated from fruit production environments in Switzerland. Based on initial screening, four phages (L1, M7, S6, and Y2) with broad host ranges were selected for detailed characterization and genome sequencing. Phage L1 is a member of the Podoviridae, with a 39.3-kbp genome featuring invariable genome ends with direct terminal repeats. Phage S6, another podovirus, was also found to possess direct terminal repeats but has a larger genome (74.7 kbp), and the virus particle exhibits a complex tail fiber structure. Phages M7 and Y2 both belong to the Myoviridae family and feature long, contractile tails and genomes of 84.7 kbp (M7) and 56.6 kbp (Y2), respectively, with direct terminal repeats. The architecture of all four phage genomes is typical for tailed phages, i.e., organized into function-specific gene clusters. All four phages completely lack genes or functions associated with lysogeny control, which correlates well with their broad host ranges and indicates strictly lytic (virulent) lifestyles without the possibility for host lysogenization. Comparative genomics revealed that M7 is similar to E. amylovora virus ΦEa21-4, whereas L1, S6, and Y2 are unrelated to any other E. amylovora phage. Instead, they feature similarities to enterobacterial viruses T7, N4, and ΦEcoM-GJ1. In a series of laboratory experiments, we provide proof of concept that specific two-phage cocktails offer the potential for biocontrol of the pathogen.

Indexed as

Host SpecificityBacteriophagesCluster AnalysisDNA, ViralEnvironmental MicrobiologyErwinia amylovoraMolecular Sequence DataMyoviridaePhylogenyPodoviridaeRecombination, GeneticSequence Analysis, DNASwitzerlandVirionDNA, Viral

Identifiers

PMID21764969
PMCPMC3165370
OpenAlexW2093434661

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.