Evidence map›Paper›PMID 21763495›Full record

ArticleJournal of molecular biology2011

T-cell receptor signaling enhances transcriptional elongation from latent HIV proviruses by activating P-TEFb through an ERK-dependent pathway.

Young Kyeung Kim, Uri Mbonye, Joseph Hokello, Jonathan Karn

Abstract read
In one paragraph

Article in Journal of molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 125 citations in OpenAlex.

  1. Trial
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  4. Review
  5. Synergistic roles of NFATc1 and c-Jun in immunomodulation.Biochemistry and biophysics reports · 2025
    Review
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34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Young Kyeung KimDepartment of Molecular Biology and Microbiology, School of Medicine, Case Western Reserve University, 10900 Euclid Avenue, Room W200, Cleveland, OH 44106-4960, USA.
Uri Mbonye
Joseph Hokello
Jonathan Karn
Case Western Reserve University · US

Funding

WG3: HIV, Co-infections and Co-morbiditiesP30AI036219 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI Sharon L. Hillier, JONATHAN KARN · 1994 to 2026
$50.0M
TRAINING IN HIV-RELATED MALIGNANCIESD43TW000011 · FIC · CASE WESTERN RESERVE UNIVERSITY · PI WHALEN, CHRISTOPHER C. · 1988 to 2012
$10.9M
Manipulating Epigenetic Control Mechanisms to Control HIV TranscriptionDP1DA028869 · NIDA · CASE WESTERN RESERVE UNIVERSITY · PI KARN, JONATHAN · 2009 to 2013
$3.9M
Molecular mechanisms regulating HIV entry and exit from latencyR01AI067093 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI KARN, JONATHAN · 2007 to 2011
$1.9M
FIC NIH HHS 5D43-TW00011FIC NIH HHS D43 TW000011NIAID NIH HHS P30 AI036219NIAID NIH HHS P30-AI036219NIAID NIH HHS R01 AI067093NIAID NIH HHS R01-AI067093NIDA NIH HHS DP1 DA028869NIDA NIH HHS DP1-DA028869
6 · The paper itself

Abstract

Latent human immunodeficiency virus (HIV) proviruses are thought to be primarily reactivated in vivo through stimulation of the T-cell receptor (TCR). Activation of the TCR induces multiple signal transduction pathways, leading to the ordered nuclear migration of the HIV transcription initiation factors NF-κB (nuclear factor κB) and NFAT (nuclear factor of activated T-cells), as well as potential effects on HIV transcriptional elongation. We have monitored the kinetics of proviral reactivation using chromatin immunoprecipitation assays to measure changes in the distribution of RNA polymerase II in the HIV provirus. Surprisingly, in contrast to TNF-α (tumor necrosis factor α) activation, where early transcription elongation is highly restricted due to rate-limiting concentrations of Tat, efficient and sustained HIV elongation and positive transcription elongation factor b (P-TEFb) recruitment are detected immediately after the activation of latent proviruses through the TCR. Inhibition of NFAT activation by cyclosporine had no effect on either HIV transcription initiation or elongation. However, examination of P-TEFb complexes by gel-filtration chromatography showed that TCR signaling led to the rapid dissociation of the large inactive P-TEFb:7SK RNP (small nuclear RNA 7SK ribonucleoprotein) complex and the release of active low-molecular-weight P-TEFb complexes. Both P-TEFb recruitment to the HIV long terminal repeat and enhanced HIV processivity were blocked by the ERK (extracellular-signal-regulated kinase) inhibitor U0126, but not by AKT (serine/threonine protein kinase Akt) and PI3K (phosphatidylinositol 3-kinase) inhibitors. In contrast to treatment with HMBA (hexamethylene bisacetamide) and DRB (5,6-dichlorobenzimidazole 1-β-ribofuranoside), which disrupt the large 7SK RNP complex but do not stimulate early HIV elongation, TCR signaling provides the first example of a physiological pathway that can shift the balance between the inactive P-TEFb pool and the active P-TEFb pool and thereby stimulate proviral reactivation.

Indexed as

Signal TransductionTranscription, GeneticButadienesChromatinChromonesCyclin-Dependent Kinase 9Cyclin TExtracellular Signal-Regulated MAP KinasesHIVHumansJurkat CellsKineticsMorpholinesNFATC Transcription FactorsNitrilesPositive Transcriptional Elongation Factor B2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-oneButadienesCCNT1 protein, humanCDK9 protein, humanChromatinChromonesCyclin-Dependent Kinase 9Cyclin TExtracellular Signal-Regulated MAP KinasesMorpholinesNFATC Transcription FactorsNitrilesPositive Transcriptional Elongation Factor BReceptors, Antigen, T-CellRibonucleoproteinstat Gene Products, Human Immunodeficiency VirusTetradecanoylphorbol AcetateU 0126

Identifiers

PMID21763495
PMCPMC3139146
OpenAlexW2061921043

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.