Evidence map›Paper›PMID 21761163›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011

Deciphering the genetics of flowering time by an association study on candidate genes in bread wheat (Triticum aestivum L.).

Michel Rousset, Isabelle Bonnin, Carine Remoué, Matthieu Falque, Bénédicte Rhoné, Jean-Baptiste Veyrieras, Delphine Madur, Alain Murigneux, François Balfourier, Jacques Le Gouis and 2 more

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
9.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Optimization of multi-environment trials for genomic selection based on crop models.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  7. Article
  8. Article
  9. Genetic control of plant height in European winter wheat cultivars.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
  10. Article
  11. GIGANTEA - an emerging story.Frontiers in plant science · 2015
    Review
  12. Article
  13. Establishing the A. E. Watkins landrace cultivar collection as a resource for systematic gene discovery in bread wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014
    Article
  14. Article
  15. Flowering time control in European winter wheat.Frontiers in plant science · 2014
    Article
  16. Article
  17. Article
  18. Article
  19. Genomic regions associated with the nitrogen limitation response revealed in a global wheat core collection.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Michel RoussetUMR de Génétique Végétale, INRA/CNRS/AgroParisTech/Univ. Paris XI, Ferme du Moulon, 91190 Gif sur Yvette, France. mrousset@moulon.inra.fr
Isabelle Bonnin
Carine Remoué
Matthieu Falque
Bénédicte Rhoné
Jean-Baptiste Veyrieras
Delphine Madur
Alain Murigneux
François Balfourier
Jacques Le Gouis
Sylvain Santoni
Isabelle Goldringer
AgroParisTech · FRGénétique, Diversité, Écophysiologie des Céréales · FRUniversité Paris-Saclay · FRCentre National de la Recherche Scientifique · FRFondation Pour la Recherche Sur la Biodiversité · FRLaboratoire Génome et Développement des Plantes · FRLimagrain (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Earliness is very important for the adaptation of wheat to environmental conditions and the achievement of high grain yield. A detailed knowledge of key genetic components of the life cycle would enable an easier control by the breeders. The objective of the study was to investigate the effect of candidate genes on flowering time. Using a collection of hexaploid wheat composed of 235 lines from diverse geographical origins, we conducted an association study for six candidate genes for flowering time and its components (vernalization sensitivity and earliness per se). The effect on the variation of earliness components of polymorphisms within the copies of each gene was tested in ANOVA models accounting for the underlying genetic structure. The collection was structured in five groups that minimized the residual covariance. Vernalization requirement and lateness tend to increase according to the mean latitude of each group. Heading date for an autumnal sowing was mainly determined by the earliness per se. Except for the Constans (CO) gene orthologous of the barley HvCO3, all gene polymorphisms had a significant impact on earliness components. The three traits used to quantify vernalization requirement were primarily associated with polymorphisms at Vrn-1 and then at Vrn-3 and Luminidependens (LD) genes. We found a good correspondence between spring/winter types and genotypes at the three homeologous copies of Vrn-1. Earliness per se was mainly explained by polymorphisms at Vrn-3 and to a lesser extent at Vrn-1, Hd-1 and Gigantea (GI) genes. Vernalization requirement and earliness as a function of geographical origin, as well as the possible role of the breeding practices in the geographical distribution of the alleles and the hypothetical adaptive value of the candidate genes, are discussed.

Indexed as

AllelesBase SequenceChromosome MappingFlowersGene Expression Regulation, PlantGenes, PlantGenetic Association StudiesGenetic VariationGenotypeHaplotypesLinkage DisequilibriumMultigene FamilyPhenotypePlant ProteinsPolymorphism, Single NucleotideQuantitative Trait LociPlant Proteins

Identifiers

PMID21761163
OpenAlexW2032311616

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.