ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011
Structural and functional comparative mapping between the Brassica A genomes in allotetraploid Brassica napus and diploid Brassica rapa.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed, 29 citations in OpenAlex.
- The functional divergence of homologous GPAT9 genes contributes to the erucic acid content of Brassica napus seeds.BMC plant biology · 2024Article
- Omics-driven advances in the understanding of regulatory landscape of peanut seed development.Frontiers in plant science · 2024Review
- TheFrontiers in plant science · 2020Article
- Transcriptional regulation of anthocyanin biosynthesis in a high-anthocyanin resynthesizedJournal of biological research (Thessalonike, Greece) · 2018Article
- Fine mapping and candidate gene analysis of an anthocyanin-rich gene, BnaA.PL1, conferring purple leaves in Brassica napus L.Molecular genetics and genomics : MGG · 2016Article
- Co-linearity and divergence of the A subgenome of Brassica juncea compared with other Brassica species carrying different A subgenomes.BMC genomics · 2016Article
- Molecular Mapping and QTL for Expression Profiles of Flavonoid Genes inFrontiers in plant science · 2016Article
- New insights into the genetic networks affecting seed fatty acid concentrations in Brassica napus.BMC plant biology · 2015Article
- Tetralocular ovary and high silique width in yellow sarson lines of Brassica rapa (subspecies trilocularis) are due to a mutation in Bra034340 gene, a homologue of CLAVATA3 in Arabidopsis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Article
- A complex recombination pattern in the genome of allotetraploid Brassica napus as revealed by a high-density genetic map.PloS one · 2014Article
- Identification of putative quantitative trait loci associated with a flavonoid related to resistance to cabbage seedpod weevil (Ceutorhynchus obstrictus) in canola derived from an intergeneric cross, Sinapis alba × Brassica napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013Article
- A consensus map of rapeseed (Brassica napus L.) based on diversity array technology markers: applications in genetic dissection of qualitative and quantitative traits.BMC genomics · 2013Article
- Quantitative trait loci mapping in Brassica rapa revealed the structural and functional conservation of genetic loci governing morphological and yield component traits in the A, B, and C subgenomes of Brassica species.DNA research : an international journal for rapid publication of reports on genes and genomes · 2013Article
- Exploiting comparative mapping among Brassica species to accelerate the physical delimitation of a genic male-sterile locus (BnRf) in Brassica napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012Article
- Characterization of interploid hybrids from crosses between Brassica juncea and B. oleracea and the production of yellow-seeded B. napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012Article
- Comparative analysis of FLC homologues in Brassicaceae provides insight into their role in the evolution of oilseed rape.PloS one · 2012Article
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Authors and funding
14 authors at 6 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Brassica napus (AACC genome) is an important oilseed crop that was formed by the fusion of the diploids B. rapa (AA) and B. oleracea (CC). The complete genomic sequence of the Brassica A genome will be available soon from the B. rapa genome sequencing project, but it is not clear how informative the A genome sequence in B. rapa (A(r)) will be for predicting the structure and function of the A subgenome in the allotetraploid Brassica species B. napus (A(n)). In this paper, we report the results of structural and functional comparative mapping between the A subgenomes of B. napus and B. rapa based on genetic maps that were anchored with bacterial artificial chromosomes (BACs)-sequence of B. rapa. We identified segmental conservation that represented by syntenic blocks in over one third of the A genome; meanwhile, comparative mapping of quantitative trait loci for seed quality traits identified a dozen homologous regions with conserved function in the A genome of the two species. However, several genomic rearrangement events, such as inversions, intra- and inter-chromosomal translocations, were also observed, covering totally at least 5% of the A genome, between allotetraploid B. napus and diploid B. rapa. Based on these results, the A genomes of B. rapa and B. napus are mostly functionally conserved, but caution will be necessary in applying the full sequence data from B. rapa to the B. napus as a result of genomic rearrangements in the A genome between the two species.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.