Evidence map›Paper›PMID 21757698›Full record

ArticleThe Journal of biological chemistry2011

Identification of integrin beta subunit mutations that alter affinity for extracellular matrix ligand.

Timmy Kendall, Leona Mukai, Alison L Jannuzi, Thomas A Bunch

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Integrins in synapse regulation.Nature reviews. Neuroscience · 2016
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Zasp regulates integrin activation.Journal of cell science · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Timmy KendallDepartment of Molecular and Cellular Biology, Arizona Cancer Center, Tucson, Arizona 85724.
Leona MukaiDepartment of Molecular and Cellular Biology, Arizona Cancer Center, Tucson, Arizona 85724.
Alison L JannuziDepartment of Molecular and Cellular Biology, Arizona Cancer Center, Tucson, Arizona 85724.
Thomas A BunchDepartment of Molecular and Cellular Biology, Arizona Cancer Center, Tucson, Arizona 85724. Electronic address: tbunch@email.arizona.edu.

Funding

VITAMIN AP30CA023074 · NCI · UNIVERSITY OF ARIZONA · PI Dan Theodorescu · 1985 to 2026
$110.2M
STRUCTURE/FUNCTION STUDIES OF THE PS INTEGRINSR01GM042474 · NIGMS · UNIVERSITY OF ARIZONA · PI BUNCH, THOMAS A · 1989 to 2010
$3.1M
NCI NIH HHS CA 023074NCI NIH HHS P30 CA023074NIGMS NIH HHS R01 GM042474NIGMS NIH HHS R01GM42474
6 · The paper itself

Abstract

We examined over 50 mutations in the Drosophila βPS integrin subunit that alter integrin function in situ for their ability to bind a soluble monovalent ligand, TWOW-1. Surprisingly, very few of the mutations, which were selected for conditional lethality in the fly, reduce the ligand binding ability of the integrin. The most prevalent class of mutations activates the integrin heterodimer. These findings emphasize the importance of integrin affinity regulation and point out how molecular interactions throughout the integrin molecule are important in keeping the integrin in a low affinity state. Mutations strongly support the controversial deadbolt hypothesis, where the CD loop in the β tail domain acts to restrain the I domain in the inactive, bent conformation. Site-directed mutations in the cytoplasmic domains of βPS and αPS2C reveal different effects on ligand binding from those observed for αIIbβ3 integrins and identify for the first time a cytoplasmic cysteine residue, conserved in three human integrins, as being important in affinity regulation. In the fly, we find that genetic interactions of the βPS mutations with reduction in talin function are consistent with the integrin affinity differences measured in cells. Additionally, these genetic interactions report on increased and decreased integrin functions that do not result in affinity changes in the PS2C integrin measured in cultured cells.

Indexed as

MutationAllelesAnimalsCell AdhesionDrosophilaDrosophila ProteinsExtracellular MatrixHumansHydrogen BondingIntegrin alpha ChainsIntegrin beta ChainsLigandsMutagenesis, Site-DirectedProtein BindingProteinsTalinDrosophila Proteinsif protein, DrosophilaIntegrin alpha ChainsIntegrin beta ChainsLigandsProteinsTalin

Identifiers

PMID21757698
PMCPMC3162457

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.