Evidence map›Paper›PMID 21757287›Full record

ArticleBiophysical chemistry2011

Thermodynamic linkage between calmodulin domains binding calcium and contiguous sites in the C-terminal tail of Ca(V)1.2.

T Idil Apak Evans, Johannes W Hell, Madeline A Shea

Open access · greenAbstract read
In one paragraph

Article in Biophysical chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. The soluble state of the HIV-1 Vpu protein forms a complex with CaProtein science : a publication of the Protein Society · 2026
    Article
  3. Article
  4. Review
  5. Regulation of Cardiac Cav1.2 Channels by Calmodulin.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Calmodulin promotes a CaFEBS letters · 2022
    Article
  8. Article
  9. NaStructure (London, England : 1993) · 2021
    Article
  10. L-Type CaBiomolecules · 2021
    Review
  11. Article
  12. Structural basis of cytoplasmic NaV1.5 and NaV1.4 regulation.The Journal of general physiology · 2021
    Review
  13. CaThe Journal of biological chemistry · 2020
    Article
  14. Article
  15. A mutually induced conformational fit underlies CaThe Journal of biological chemistry · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

T Idil Apak EvansDepartment of Biochemistry, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA 52242-1109, United States. idil-apak@uiowa.edu
Johannes W Hell
Madeline A Shea
University of Iowa · US

Funding

INTERDISCIPLINARY CARDIOVASCULAR RESEARCH FELLOWSHIPT32HL007121 · NHLBI · UNIVERSITY OF IOWA · PI LONDON, BARRY · 1985 to 2020
$15.1M
Subcellular Localization of Cav1.2 by alpha-actininR01AG017502 · NIA · UNIVERSITY OF WISCONSIN MADISON · PI HELL, JOHANNES W · 2000 to 2011
$3.3M
MOLECULAR DISSECTION OF CALMODULIN DOMAIN INTERACTIONSR01GM057001 · NIGMS · UNIVERSITY OF IOWA · PI SHEA, MADELINE A · 1998 to 2015
$2.9M
Calmodulin Domain Interactions with L-type Ca2+ ChannelsF32GM077927 · NIGMS · UNIVERSITY OF IOWA · PI EVANS, TURAN I · 2006 to 2007
$99k
NHLBI NIH HHS T32 HL007121NHLBI NIH HHS T32 HL 07121-30NIA NIH HHS AG0175002NIGMS NIH HHS F32 GM077927NIGMS NIH HHS GM57001NIGMS NIH HHS NIHF32 GM 77927NIGMS NIH HHS R01 GM057001
6 · The paper itself

Abstract

Calmodulin (CaM) binding to the intracellular C-terminal tail (CTT) of the cardiac L-type Ca(2+) channel (Ca(V)1.2) regulates Ca(2+) entry by recognizing sites that contribute to negative feedback mechanisms for channel closing. CaM associates with Ca(V)1.2 under low resting [Ca(2+)], but is poised to change conformation and position when intracellular [Ca(2+)] rises. CaM binding Ca(2+), and the domains of CaM binding the CTT are linked thermodynamic functions. To better understand regulation, we determined the energetics of CaM domains binding to peptides representing pre-IQ sites A(1588), and C(1614) and the IQ motif studied as overlapping peptides IQ(1644) and IQ'(1650) as well as their effect on calcium binding. (Ca(2+))(4)-CaM bound to all four peptides very favorably (K(d)≤2 nM). Linkage analysis showed that IQ(1644-1670) bound with a K(d)~1 pM. In the pre-IQ region, (Ca(2+))(2)-N-domain bound preferentially to A(1588), while (Ca(2+))(2)-C-domain preferred C(1614). When bound to C(1614), calcium binding in the N-domain affected the tertiary conformation of the C-domain. Based on the thermodynamics, we propose a structural mechanism for calcium-dependent conformational change in which the linker between CTT sites A and C buckles to form an A-C hairpin that is bridged by calcium-saturated CaM.

Indexed as

Amino Acid SequenceAnimalsCalciumCalcium Channels, L-TypeCalmodulinCatalytic DomainModels, MolecularMolecular Sequence DataProtein BindingRatsThermodynamicsCalciumCalcium Channels, L-TypeCalmodulinL-type calcium channel alpha(1C)

Identifiers

PMID21757287
PMCPMC3340011
OpenAlexW2035949896

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.