Evidence map›Paper›PMID 21750680›Full record

ArticlePLoS genetics2011

Loss of the BMP antagonist, SMOC-1, causes Ophthalmo-acromelic (Waardenburg Anophthalmia) syndrome in humans and mice.

Joe Rainger, Ellen van Beusekom, Jacqueline K Ramsay, Lisa McKie, Lihadh Al-Gazali, Rosanna Pallotta, Anita Saponari, Peter Branney, Malcolm Fisher, Harris Morrison and 26 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 93 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Why do humans need thrombospondin-1?Journal of cell communication and signaling · 2023
    Review
  11. Article
  12. bioRxiv : the preprint server for biology · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Frontiers in cell and developmental biology · 2020
    Review
  18. Article
  19. Sostdc1 is expressed in all major compartments of developing and adult mammalian eyes.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2019
    Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

36 authors at 18 institutions in 9 countries.

Joe RaingerMedical Research Council Human Genetics Unit, Institute of Genetics and Molecular Medicine, Western General Hospital, Edinburgh, UK.
Ellen van Beusekom
Jacqueline K Ramsay
Lisa McKie
Lihadh Al-Gazali
Rosanna Pallotta
Anita Saponari
Peter Branney
Malcolm Fisher
Harris Morrison
Louise Bicknell
Philippe Gautier
Paul Perry
Kishan Sokhi
David Sexton
Tanya M Bardakjian
Adele S Schneider
Nursel Elcioglu
Ferda Ozkinay
Rainer Koenig
Andre Mégarbané
C Nur Semerci
Ayesha Khan
Saemah Zafar
Raoul Hennekam
Sérgio B Sousa
Lina Ramos
Livia Garavelli
Andrea Superti Furga
Anita Wischmeijer
Ian J Jackson
Gabriele Gillessen-Kaesbach
Han G Brunner
Dagmar Wieczorek
Hans van Bokhoven
David R Fitzpatrick
Medical Research Council · GBWestern General Hospital · GBEinstein Medical Center Philadelphia · USRadboud University Medical Center · NLSanta Maria Nuova Hospital · ITUniversity of Chieti-Pescara · ITEdinburgh Royal Infirmary · GBEge University · TRGoethe University Frankfurt · DEInstitut für Medizinische Informatik, Biometrie und Epidemiologie · DEMarmara University · TRPamukkale University · TRRadboud University Nijmegen · NLSaint Joseph University · LBUnited Arab Emirates University · AEUniversity of Amsterdam · NLUniversity of Lausanne · CHUniversity of Lübeck · DE

Funding

Medical Research Council MC_PC_U127561112Medical Research Council MC_U127561093Medical Research Council MC_U127561112
6 · The paper itself

Abstract

Ophthalmo-acromelic syndrome (OAS), also known as Waardenburg Anophthalmia syndrome, is defined by the combination of eye malformations, most commonly bilateral anophthalmia, with post-axial oligosyndactyly. Homozygosity mapping and subsequent targeted mutation analysis of a locus on 14q24.2 identified homozygous mutations in SMOC1 (SPARC-related modular calcium binding 1) in eight unrelated families. Four of these mutations are nonsense, two frame-shift, and two missense. The missense mutations are both in the second Thyroglobulin Type-1 (Tg1) domain of the protein. The orthologous gene in the mouse, Smoc1, shows site- and stage-specific expression during eye, limb, craniofacial, and somite development. We also report a targeted pre-conditional gene-trap mutation of Smoc1 (Smoc1(tm1a)) that reduces mRNA to ∼10% of wild-type levels. This gene-trap results in highly penetrant hindlimb post-axial oligosyndactyly in homozygous mutant animals (Smoc1(tm1a/tm1a)). Eye malformations, most commonly coloboma, and cleft palate occur in a significant proportion of Smoc1(tm1a/tm1a) embryos and pups. Thus partial loss of Smoc-1 results in a convincing phenocopy of the human disease. SMOC-1 is one of the two mammalian paralogs of Drosophila Pentagone, an inhibitor of decapentaplegic. The orthologous gene in Xenopus laevis, Smoc-1, also functions as a Bone Morphogenic Protein (BMP) antagonist in early embryogenesis. Loss of BMP antagonism during mammalian development provides a plausible explanation for both the limb and eye phenotype in humans and mice.

Indexed as

MutationOsteonectinAnimalsAnophthalmosBone Morphogenetic Protein 1ColobomaDNA Mutational AnalysisExtremitiesEyeHumansMiceMice, Inbred C57BLMice, KnockoutModels, AnimalPedigreeSyndactylyBMP1 protein, humanBmp1 protein, mouseBone Morphogenetic Protein 1OsteonectinSMOC1 protein, humanSMOC-1 protein, mouse

Identifiers

PMID21750680
PMCPMC3131273
OpenAlexW2111830519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.