Evidence map›Paper›PMID 21746900›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Stereospecific gating of functional motions in Pin1.

Andrew T Namanja, Xiaodong J Wang, Bailing Xu, Ana Y Mercedes-Camacho, Kimberly A Wilson, Felicia A Etzkorn, Jeffrey W Peng

Abstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. PIN1 Provides Dynamic Control of MYC in Response to Extrinsic Signals.Frontiers in cell and developmental biology · 2020
    Article
  15. Post-translational Modifications of the Peptidyl-Prolyl Isomerase Pin1.Frontiers in cell and developmental biology · 2020
    Review
  16. Activity and Affinity of Pin1 Variants.Molecules (Basel, Switzerland) · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Andrew T NamanjaDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
Xiaodong J Wang
Bailing Xu
Ana Y Mercedes-Camacho
Kimberly A Wilson
Felicia A Etzkorn
Jeffrey W Peng
Virginia Tech · USUniversity of Notre Dame · US

Funding

VT Post Baccalaureate Research and Education ProgramR25GM066534 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI SMITH, EDWARD J · 2003 to 2024
$7.6M
Functional Motions of Modular Signaling ProteinsR01GM083081 · NIGMS · UNIVERSITY OF NOTRE DAME · PI PENG, JEFFREY W · 2008 to 2012
$1.3M
Designed Inhibitors of Pin1 in MitosisR01CA110940 · NCI · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI ETZKORN, FELICIA A · 2005 to 2009
$926k
NCI NIH HHS R01 CA110940NCI NIH HHS R01-CA110940NIGMS NIH HHS R01 GM083081NIGMS NIH HHS R01-GM083081NIGMS NIH HHS R25 GM066534
6 · The paper itself

Abstract

Pin1 is a modular enzyme that accelerates the cis-trans isomerization of phosphorylated-Ser/Thr-Pro (pS/T-P) motifs found in numerous signaling proteins regulating cell growth and neuronal survival. We have used NMR to investigate the interaction of Pin1 with three related ligands that include a pS-P substrate peptide, and two pS-P substrate analogue inhibitors locked in the cis and trans conformations. Specifically, we compared the ligand binding modes and binding-induced changes in Pin1 side-chain flexibility. The cis and trans binding modes differ, and produce different mobility in Pin1. The cis-locked inhibitor and substrate produced a loss of side-chain flexibility along an internal conduit of conserved hydrophobic residues, connecting the domain interface with the isomerase active site. The trans-locked inhibitor produces a weaker conduit response. Thus, the conduit response is stereoselective. We further show interactions between the peptidyl-prolyl isomerase and Trp-Trp (WW) domains amplify the conduit response, and alter binding properties at the remote peptidyl-prolyl isomerase active site. These results suggest that specific input conformations can gate dynamic changes that support intraprotein communication. Such gating may help control the propagation of chemical signals by Pin1, and other modular signaling proteins.

Indexed as

Amino Acid MotifsBinding, CompetitiveBiophysical PhenomenaCatalytic DomainEnzyme InhibitorsHumansHydrophobic and Hydrophilic InteractionsIn Vitro TechniquesModels, MolecularNIMA-Interacting Peptidylprolyl IsomeraseNuclear Magnetic Resonance, BiomolecularPeptidylprolyl IsomerasePhosphorylationProtein ConformationProtein Interaction Domains and MotifsRecombinant ProteinsEnzyme InhibitorsNIMA-Interacting Peptidylprolyl IsomerasePeptidylprolyl IsomerasePIN1 protein, humanRecombinant Proteins

Identifiers

PMID21746900
PMCPMC3145719
OpenAlexW1989895869

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.