Evidence map›Paper›PMID 21746880›Full record

ArticleMolecular and cellular biology2011

A novel role of vimentin filaments: binding and stabilization of collagen mRNAs.

Azariyas A Challa, Branko Stefanovic

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 158 citations in OpenAlex.

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24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Azariyas A ChallaDepartment of Biomedical Sciences, College of Medicine, Florida State University, Tallahassee, FL 32306, USA.
Branko Stefanovic
Florida State University · US

Funding

Regulation of Type I Collagen in Hepatic FibrosisR01DK059466 · NIDDK · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI STEFANOVIC, BRANKO · 2002 to 2012
$2.4M
NIDDK NIH HHS 5R01DK059466-08NIDDK NIH HHS R01 DK059466
6 · The paper itself

Abstract

The stem-loop in the 5' untranslated region (UTR) of collagen α1(I) and α2(I) mRNAs (5'SL) is the key element regulating their stability and translation. Stabilization of collagen mRNAs is the predominant mechanism for high collagen expression in fibrosis. LARP6 binds the 5'SL of α1(I) and α2(I) mRNAs with high affinity. Here, we report that vimentin filaments associate with collagen mRNAs in a 5'SL- and LARP6-dependent manner and stabilize collagen mRNAs. LARP6 interacts with vimentin filaments through its La domain and colocalizes with the filaments in vivo. Knockdown of LARP6 by small interfering RNA (siRNA) or mutation of the 5'SL abrogates the interaction of collagen mRNAs with vimentin filaments. Vimentin knockout fibroblasts produce reduced amounts of type I collagen due to decreased stability of collagen α1(I) and α2(I) mRNAs. Disruption of vimentin filaments using a drug or by expression of dominant-negative desmin reduces type I collagen expression, primarily due to decreased stability of collagen mRNAs. RNA fluorescence in situ hybridization (FISH) experiments show that collagen α1(I) and α2(I) mRNAs are associated with vimentin filaments in vivo. Thus, vimentin filaments may play a role in the development of tissue fibrosis by stabilizing collagen mRNAs. This finding will serve as a rationale for targeting vimentin in the development of novel antifibrotic therapies.

Indexed as

5' Untranslated RegionsAnimalsAutoantigensCell LineCollagen Type IDesminFibroblastsFibrosisGene Knock-In TechniquesGene Knockout TechniquesHEK293 CellsHumansIn Situ HybridizationIntermediate FilamentsInverted Repeat SequencesMice5' Untranslated RegionsAutoantigensCollagen Type IDesminRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerRNA, Small InterferingSS-B AntigenVimentin

Identifiers

PMID21746880
PMCPMC3165730
OpenAlexW2163220944

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.