Evidence map›Paper›PMID 21743478›Full record

ArticleNature immunology2011

Systems biology of vaccination for seasonal influenza in humans.

Helder I Nakaya, Jens Wrammert, Eva K Lee, Luigi Racioppi, Stephanie Marie-Kunze, W Nicholas Haining, Anthony R Means, Sudhir P Kasturi, Nooruddin Khan, Gui-Mei Li and 10 more

3 registry-linked trialsOpen access · bronzeAbstract read
In one paragraph

Article in Nature immunology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 3 registered trials, which are not on this map. Cited by 562 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
562citing papers in PubMed, 1 pooled it
37.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01730144 completednot on this mapstarted 2012, after this paper: background citation

Elucidation of the Mucosal Immune Responses to Live Attenuated Influenza Vaccine In Healthy Adults

TypeobservationalSponsorNational Institute of Allergy and Infectious Diseases (NIAID)Ran2012 to 2019Enrolled10ConditionsNormal Physiology
NCT01916759 nacompletednot on this mapstarted 2013, after this paper: background citation

Systems Biological Responses to Influenza Vaccination in an HIV-infected and HIV-uninfected Adult Population in Kampala, Uganda

TypeinterventionalSponsorEmory UniversityRan2013 to 2014Enrolled63ConditionsHIV, Acquired Immunodeficiency Syndrome, InfluenzaArmsSeasonal trivalent inactivated influenza vaccine (Vaxigrip®)
NCT02765126 naunknown statusnot on this mapstarted 2016, after this paper: background citation

Clifford Craig Vaccine Trial Centre: Heterologous Effect of Diptheria, Tetanus, Acellular Pertussis Vaccination on Influenza Vaccine Challenge in the Elderly

TypeinterventionalSponsorClifford Craig Medical Research TrustRan2016 to 2019Enrolled450ConditionsHeterologous Effects of VaccinesArmsSeasonal influenza vaccine, Diphtheria-tetanus-acellular pertussis vaccine
3 · Its place in the literature

Who cites it

562 citing papers in PubMed, 1 synthesis or guideline pooled it, 821 citations in OpenAlex.

  1. Pooled it
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  16. How vaccine research took me on an international journey.Human vaccines & immunotherapeutics · 2026
    Article
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  18. Review
  19. Article
  20. Review

502 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 2 countries.

Helder I NakayaEmory Vaccine Center, Emory University, Atlanta, Georgia, USA.
Jens Wrammert
Eva K Lee
Luigi Racioppi
Stephanie Marie-Kunze
W Nicholas Haining
Anthony R Means
Sudhir P Kasturi
Nooruddin Khan
Gui-Mei Li
Megan McCausland
Vibhu Kanchan
Kenneth E Kokko
Shuzhao Li
Rivka Elbein
Aneesh K Mehta
Alan Aderem
Kanta Subbarao
Rafi Ahmed
Bali Pulendran
Emory University · USUniversity of Naples Federico II · ITDana-Farber Cancer Institute · USGeorgia Institute of Technology · USInstitute for Systems Biology · USNational Institutes of Health · US

Funding

Yessinia autotransporters (Yaps): Structure, function, and host responseU54AI057157 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SEMPOWSKI, GREGORY D · 2003 to 2013
$91.4M
VACCINE INDUCED IMMUNITY IN THE YOUNG AND AGEDU19AI057266 · NIAID · EMORY UNIVERSITY · PI Rafi Ahmed · 2003 to 2026
$81.7M
Systems Biological Analysis of Innate and Adaptive Responses to VaccinationU19AI090023 · NIAID · EMORY UNIVERSITY · PI AHMED, RAFI, LI, SHUZHAO · 2010 to 2021
$45.0M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025008 · NCRR · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2007 to 2011
$29.0M
Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
Immune Function and Biodefense in Immunocrompromised PopulationsN01AI50025 · NIAID · EMORY UNIVERSITY · 2007 to 2008
$8.1M
STRUCTURE/FUNCTION OF GENETIC ENGINEERED CALMODULINSR01GM033976 · NIGMS · DUKE UNIVERSITY · PI MEANS, ANTHONY R · 1985 to 2015
$5.4M
T CELL MEMORY TO VIRUSESR01AI030048 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AHMED, RAFI · 1990 to 2022
$5.2M
Understanding the Role of Mucosal Antigen Presenting Cells in Regulating Immune ResponseR37AI048638 · NIAID · STANFORD UNIVERSITY · PI PULENDRAN, BALI · 2009 to 2018
$4.0M
Polarizing T Cell Responses in vivo With Dendritic CellsR37DK057665 · NIDDK · STANFORD UNIVERSITY · PI PULENDRAN, BALI · 2010 to 2019
$3.9M
T CELL MEMORY TO VIRUSESR37AI030048 · NIAID · EMORY UNIVERSITY · PI AHMED, RAFI · 2001 to 2010
$3.9M
POLARIZING T CELL RESPONSES IN VIVO WITH DENDRITIC CELLSR01DK057665 · NIDDK · EMORY UNIVERSITY · PI PULENDRAN, BALI · 2000 to 2009
$3.0M
NCATS NIH HHS UL1 TR000454NCRR NIH HHS UL1 RR025008NIAID NIH HHS AI057266NIAID NIH HHS AI30048NIAID NIH HHS HHSN266200700006CNIAID NIH HHS N01 AI030048NIAID NIH HHS N01 AI050025NIAID NIH HHS N01 AI50025NIAID NIH HHS R37 AI048638NIAID NIH HHS R37AI48638NIAID NIH HHS R38 AI140299NIAID NIH HHS U19 AI057266NIAID NIH HHS U19AI057266NIAID NIH HHS U19 AI090023NIAID NIH HHS U19AI090023NIAID NIH HHS U54 AI057157NIAID NIH HHS U54AI057157NIDDK NIH HHS DK074701NIDDK NIH HHS R01 DK057665NIDDK NIH HHS R01DK057665NIDDK NIH HHS R01 DK074701NIDDK NIH HHS R37 DK057665NIGMS NIH HHS R01 GM033976
6 · The paper itself

Abstract

Here we have used a systems biology approach to study innate and adaptive responses to vaccination against influenza in humans during three consecutive influenza seasons. We studied healthy adults vaccinated with trivalent inactivated influenza vaccine (TIV) or live attenuated influenza vaccine (LAIV). TIV induced higher antibody titers and more plasmablasts than LAIV did. In subjects vaccinated with TIV, early molecular signatures correlated with and could be used to accurately predict later antibody titers in two independent trials. Notably, expression of the kinase CaMKIV at day 3 was inversely correlated with later antibody titers. Vaccination of CaMKIV-deficient mice with TIV induced enhanced antigen-specific antibody titers, which demonstrated an unappreciated role for CaMKIV in the regulation of antibody responses. Thus, systems approaches can be used to predict immunogenicity and provide new mechanistic insights about vaccines.

Indexed as

Adaptive ImmunityAdolescentAdultAnimalsAntibodies, ViralGene Expression ProfilingHemagglutination Inhibition TestsHumansImmunity, InnateInfluenza, HumanInfluenza VaccinesMiceMice, Inbred C57BLMice, KnockoutMiddle AgedOrthomyxoviridaeAntibodies, ViralInfluenza VaccinesVaccines, AttenuatedVaccines, Inactivated

Identifiers

PMID21743478
PMCPMC3140559
OpenAlexW2059980695

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.