Evidence map›Paper›PMID 21742057›Full record

ArticleGene expression patterns : GEP2011

A zebrafish SKIV2L2-enhancer trap line provides a useful tool for the study of peripheral sensory circuit development.

Jane A Cox, Anthony R McAdow, Amy E Dinitz, Andrew S McCallion, Stephen L Johnson, Mark M Voigt

Open access · greenAbstract read
In one paragraph

Article in Gene expression patterns : GEP, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 87% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Jane A CoxDepartment of Pharmacological and Physiological Science, Saint Louis University, MO 63104, USA.
Anthony R McAdow
Amy E Dinitz
Andrew S McCallion
Stephen L Johnson
Mark M Voigt
Saint Louis University · USWashington University in St. Louis · USJohns Hopkins Medicine · USJohns Hopkins University · US

Funding

REGULATION OF ADULT STEM CELLS IN ZEBRAFISHR01GM056988 · NIGMS · WASHINGTON UNIVERSITY · PI JOHNSON, STEPHEN L · 1998 to 2016
$6.0M
Genetics of Disease Gene RegulationR01GM071648 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI MCCALLION, ANDREW S · 2006 to 2010
$1.6M
Genetics of latent zebrafish melanoblastsR56GM056988 · NIGMS · WASHINGTON UNIVERSITY · PI JOHNSON, STEPHEN L · 2007 to 2007
$406k
Morphogenesis of the peripheral sensory nervous systemR21NS060074 · NINDS · SAINT LOUIS UNIVERSITY · PI VOIGT, MARK M · 2008 to 2009
$347k
NIGMS NIH HHS GM56988NIGMS NIH HHS GM71648NIGMS NIH HHS R01 GM056988NIGMS NIH HHS R01 GM071648NIGMS NIH HHS R56 GM056988NINDS NIH HHS NS060074NINDS NIH HHS R21 NS060074
6 · The paper itself

Abstract

The zebrafish is an ideal model for elucidating the cellular and molecular mechanisms that underlie development of the peripheral nervous system. A transgenic line that selectively labels all the sensory circuits would be a valuable tool for such investigations. In this study, we describe such a line: the enhancer trap zebrafish line Tg(SKIV2L2:gfp)(j1775) which expresses green fluorescent protein (gfp) in the peripheral sensory ganglia. We show that this transgene marks all peripheral ganglia and sensory nerves, beginning at the time when the neurons are first extending their processes, but does not label the efferent nerves. The trapped reporter is inserted just upstream of a previously poorly described gene: lhfpl4 on LG6. The expression pattern of this gene by in situ hybridization reveals a different, but overlapping, pattern of expression compared to that of the transgene. This pattern also does not mimic that of the gene (skiv2l2), which provided the promoter element in the construct. These findings indicate that reporter expression is not dictated by an endogenous enhancer element, but instead arises through an unknown mechanism. Regardless, this reporter line should prove to be a valuable tool in the investigation of peripheral nervous system formation in the zebrafish.

Indexed as

Enhancer Elements, GeneticAnimalsAnimals, Genetically ModifiedGangliaGenes, ReporterGreen Fluorescent ProteinsNeurogenesisPeripheral Nervous SystemRNA HelicasesSensory Receptor CellsZebrafishGreen Fluorescent ProteinsMTREX protein, humanRNA Helicases

Identifiers

PMID21742057
PMCPMC3163734
OpenAlexW2084638271

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.