Evidence map›Paper›PMID 21740935›Full record

ArticleVirus research2011

Genetic characterization of K13965, a strain of Oak Vale virus from Western Australia.

Phenix-Lan Quan, David T Williams, Cheryl A Johansen, Komal Jain, Alexandra Petrosov, Sinead M Diviney, Alla Tashmukhamedova, Stephen K Hutchison, Robert B Tesh, John S Mackenzie and 2 more

Abstract read
In one paragraph

Article in Virus research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 24 citations in OpenAlex.

  1. Small hydrophobic (SH) proteins ofJournal of virology · 2024
    Review
  2. A Systematic Review on the Viruses ofTropical medicine and infectious disease · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Phenix-Lan QuanCenter for Infection and Immunity, Columbia University, New York, NY 10032, USA.
David T Williams
Cheryl A Johansen
Komal Jain
Alexandra Petrosov
Sinead M Diviney
Alla Tashmukhamedova
Stephen K Hutchison
Robert B Tesh
John S Mackenzie
Thomas Briese
W Ian Lipkin
Columbia University · USCurtin University · AUThe University of Texas Medical Branch at Galveston · USUniversity of Western Australia · AU

Funding

Viral Pathogenesis and TherapeuticsU54AI057158 · NIAID · WADSWORTH CENTER · PI LIPKIN, W. IAN · 2003 to 2014
$100.8M
NIAID NIH HHS AI57158NIAID NIH HHS U54 AI057158PHS HHS HHSN27200004/DO4PHS HHS HHSN27220100004OI
6 · The paper itself

Abstract

K13965, an uncharacterized virus, was isolated in 1993 from Anopheles annulipes mosquitoes collected in the Kimberley region of northern Western Australia. Here, we report its genomic sequence, identify it as a rhabdovirus, and characterize its phylogenetic relationships. The genome comprises a P' (C) and SH protein similar to the recently characterized Tupaia and Durham viruses, and shows overlap between G and L genes. Comparison of K13965 genome sequence to other rhabdoviruses identified K13965 as a strain of the unclassified Australian Oak Vale rhabdovirus, whose complete genome sequence we also determined. Phylogenetic analysis of N and L sequences indicated genetic relationship to a recently proposed Sandjima virus clade, although the Oak Vale virus sequences form a branch separate from the African members of that group.

Indexed as

Genome, ViralSequence Analysis, DNAAnimalsAnophelesCluster AnalysisFemaleMolecular Sequence DataPhylogenyRhabdoviridaeRNA, ViralViral ProteinsWestern AustraliaRNA, ViralViral Proteins

Identifiers

PMID21740935
PMCPMC3174045
OpenAlexW2068116487

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.