Evidence map›Paper›PMID 21739501›Full record

ArticleProtein science : a publication of the Protein Society2011

Designed protein mimics of the Ebola virus glycoprotein GP2 α-helical bundle: stability and pH effects.

Joseph S Harrison, Chelsea D Higgins, Kartik Chandran, Jonathan R Lai

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
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  14. Fusion of Enveloped Viruses in Endosomes.Traffic (Copenhagen, Denmark) · 2016
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Design and characterization of ebolavirus GP prehairpin intermediate mimics as drug targets.Protein science : a publication of the Protein Society · 2015
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Joseph S HarrisonDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Chelsea D Higgins
Kartik Chandran
Jonathan R Lai
Albert Einstein College of Medicine · US

Funding

MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008572 · NIGMS · YESHIVA UNIVERSITY · PI BRENOWITZ, MICHAEL D. · 1995 to 2009
$3.0M
Mechanisms of Ebolavirus and Marburgvirus Entry into CellsR01AI088027 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI CHANDRAN, KARTIK · 2010 to 2014
$2.0M
Targeting Viral Envelope Glycoproteins with Synthetic AntibodiesR01AI090249 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LAI, JONATHAN R. · 2010 to 2014
$2.0M
NIAID NIH HHS R01 AI088027NIAID NIH HHS R01-AI088027NIAID NIH HHS R01 AI090249NIAID NIH HHS R01-AI090249NIGMS NIH HHS T32 GM008572NIGMS NIH HHS T32-GM008572
6 · The paper itself

Abstract

Ebola virus (EboV) belongs to the Filoviridae family of viruses that causes severe and fatal hemhorragic fever. Infection by EboV involves fusion between the virus and host cell membranes mediated by the envelope glycoprotein GP2 of the virus. Similar to the envelope glycoproteins of other viruses, the central feature of the GP2 ectodomain postfusion structure is a six-helix bundle formed by the protein's N- and C-heptad repeat regions (NHR and CHR, respectively). Folding of this six-helix bundle provides the energetic driving force for membrane fusion; in other viruses, designed agents that disrupt formation of the six-helix bundle act as potent fusion inhibitors. To interrogate determinants of EboV GP2-mediated membrane fusion, we designed model proteins that consist of the NHR and CHR segments linked by short protein linkers. Circular dichroism and gel filtration studies indicate that these proteins adopt stable α-helical folds consistent with design. Thermal denaturation indicated that the GP2 six-helix bundle is highly stable at pH 5.3 (melting temperature, T(m) , of 86.8 ± 2.0°C and van't Hoff enthalpy, ΔH(vH) , of -28.2 ± 1.0 kcal/mol) and comparable in stability to other viral membrane fusion six-helix bundles. We found that the stability of our designed α-helical bundle proteins was dependent on buffering conditions with increasing stability at lower pH. Small pH differences (5.3-6.1) had dramatic effects (ΔT(m) = 37°C) suggesting a mechanism for conformational control that is dependent on environmental pH. These results suggest a role for low pH in stabilizing six-helix bundle formation during the process of GP2-mediated viral membrane fusion.

Indexed as

Amino Acid SequenceChromatography, GelCircular DichroismEbolavirusGlycoproteinsHydrogen-Ion ConcentrationModels, BiologicalMolecular Sequence DataProtein StabilityProtein Structure, SecondaryViral Envelope ProteinsVirus InternalizationGlycoproteinsViral Envelope Proteins

Identifiers

PMID21739501
PMCPMC3190153
OpenAlexW1993999867

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.