Evidence map›Paper›PMID 21738686›Full record

ArticlePloS one2011

X chromosome inactivation and differentiation occur readily in ES cells doubly-deficient for macroH2A1 and macroH2A2.

Borko Tanasijevic, Theodore P Rasmussen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Epigenetic Regulation of Myogenesis: Focus on the Histone Variants.International journal of molecular sciences · 2021
    Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Progress in understanding the molecular mechanism ofPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Histone variants and cellular plasticity.Trends in genetics : TIG · 2015
    Review
  18. Mice without macroH2A histone variants.Molecular and cellular biology · 2014
    Article
  19. Histone variants: emerging players in cancer biology.Cellular and molecular life sciences : CMLS · 2014
    Review
  20. Long nonoding RNAs in the X-inactivation center.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Borko TanasijevicCenter for Regenerative Biology, University of Connecticut, Storrs, Connecticut, United States of America.
Theodore P Rasmussen
University of Connecticut · US

Funding

Developmental Regulation of MacroH2A1 Chromatin AssemblyR01AG023687 · NIA · UNIVERSITY OF CONNECTICUT STORRS · PI RASMUSSEN, THEODORE PETER · 2005 to 2009
$1.3M
NIA NIH HHS R01 AG023687NIA NIH HHS R01AG23687
6 · The paper itself

Abstract

Macrohistones (mH2As) are unusual histone variants found exclusively in vertebrate chromatin. In mice, the H2afy gene encodes two splice variants, mH2A1.1 and mH2A1.2 and a second gene, H2afy2, encodes an additional mH2A2 protein. Both mH2A isoforms have been found enriched on the inactive X chromosome (Xi) in differentiated mammalian female cells, and are incorporated into the chromatin of developmentally-regulated genes. To investigate the functional significance of mH2A isoforms for X chromosome inactivation (XCI), we produced male and female embryonic stem cell (ESC) lines with stably-integrated shRNA constructs that simultaneously target both mH2A1 and mH2A2. Surprisingly, we find that female ESCs deficient for both mH2A1 and mH2A2 readily execute and maintain XCI upon differentiation. Furthermore, male and female mH2A-deficient ESCs proliferate normally under pluripotency culture conditions, and respond to several standard differentiation procedures efficiently. Our results show that XCI can readily proceed with substantially reduced total mH2A content.

Indexed as

AnimalsBlotting, WesternCell DifferentiationEmbryonic Stem CellsFemaleFluorescent Antibody TechniqueHistonesMaleMiceNeural PlateReverse Transcriptase Polymerase Chain ReactionTeratomaX Chromosome InactivationHistonesmacroH2A histone

Identifiers

PMID21738686
PMCPMC3127949
OpenAlexW2064565230

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.