Evidence map›Paper›PMID 21738464›Full record

ArticlePLoS computational biology2011

Computational investigation of the changing patterns of subtype specific NMDA receptor activation during physiological glutamatergic neurotransmission.

Pallab Singh, Adam J Hockenberry, Vineet R Tiruvadi, David F Meaney

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.0field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Regional NeurodegenerationFrontiers in computational neuroscience · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Cellular biomechanics of central nervous system injury.Handbook of clinical neurology · 2015
    Review
  11. Single-neuron NMDA receptor phenotype influences neuronal rewiring and reintegration following traumatic injury.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  12. GluN2A and GluN2B subunit-containing NMDA receptors in hippocampal plasticity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2014
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Pallab SinghDepartment of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Adam J Hockenberry
Vineet R Tiruvadi
David F Meaney
University of Pennsylvania · US

Funding

Force Transmission in the Central Nervous SystemR01HD041699 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI MEANEY, DAVID F · 2001 to 2011
$6.3M
BIOMECHANICAL ANALYSIS OF TRAUMATIC BRAIN INJURY MODELSR01NS035712 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MEANEY, DAVID F · 1997 to 2010
$2.9M
NICHD NIH HHS HD41699NICHD NIH HHS R01 HD041699NINDS NIH HHS NS35712NINDS NIH HHS R01 NS035712
6 · The paper itself

Abstract

NMDA receptors (NMDARs) are the major mediator of the postsynaptic response during synaptic neurotransmission. The diversity of roles for NMDARs in influencing synaptic plasticity and neuronal survival is often linked to selective activation of multiple NMDAR subtypes (NR1/NR2A-NMDARs, NR1/NR2B-NMDARs, and triheteromeric NR1/NR2A/NR2B-NMDARs). However, the lack of available pharmacological tools to block specific NMDAR populations leads to debates on the potential role for each NMDAR subtype in physiological signaling, including different models of synaptic plasticity. Here, we developed a computational model of glutamatergic signaling at a prototypical dendritic spine to examine the patterns of NMDAR subtype activation at temporal and spatial resolutions that are difficult to obtain experimentally. We demonstrate that NMDAR subtypes have different dynamic ranges of activation, with NR1/NR2A-NMDAR activation sensitive at univesicular glutamate release conditions, and NR2B containing NMDARs contributing at conditions of multivesicular release. We further show that NR1/NR2A-NMDAR signaling dominates in conditions simulating long-term depression (LTD), while the contribution of NR2B containing NMDAR significantly increases for stimulation frequencies that approximate long-term potentiation (LTP). Finally, we show that NR1/NR2A-NMDAR content significantly enhances response magnitude and fidelity at single synapses during chemical LTP and spike timed dependent plasticity induction, pointing out an important developmental switch in synaptic maturation. Together, our model suggests that NMDAR subtypes are differentially activated during different types of physiological glutamatergic signaling, enhancing the ability for individual spines to produce unique responses to these different inputs.

Indexed as

Models, NeurologicalAnalysis of VarianceCA1 Region, HippocampalCalciumComputational BiologyDendritic SpinesGlutamic AcidReceptors, N-Methyl-D-AspartateSignal TransductionStatistics, NonparametricStochastic ProcessesSynapsesSynaptic TransmissionCalciumGlutamic AcidReceptors, N-Methyl-D-Aspartate

Identifiers

PMID21738464
PMCPMC3127809
OpenAlexW1977315137

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.