Evidence map›Paper›PMID 21738395›Full record

ArticleMolecular vision2011

Molecular epidemiology of Usher syndrome in Italy.

Diego Vozzi, Anu Aaspõllu, Emmanouil Athanasakis, Anna Berto, Antonella Fabretto, Danilo Licastro, Maigi Külm, Francesco Testa, Patrizia Trevisi, Marju Vahter and 5 more

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Dual AAV-based PCDH15 gene therapy achieves sustained rescue of visual function in a mouse model of Usher syndrome 1F.Molecular therapy : the journal of the American Society of Gene Therapy · 2023
    Article
  4. Usher Syndrome.Audiology research · 2022
    Review
  5. Article
  6. Structural modeling, mutation analysis, andComputational and structural biotechnology journal · 2020
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Targeted exon sequencing in Usher syndrome type I.Investigative ophthalmology & visual science · 2014
    Article
  13. Article
  14. Syndromes of hearing loss associated with visual loss.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2014
    Review
  15. Experience of targeted Usher exome sequencing as a clinical test.Molecular genetics & genomic medicine · 2014
    Article
  16. Article
  17. Digenic inheritance in medical genetics.Journal of medical genetics · 2013
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Diego VozziMedical Genetics, Department of Reproductive Sciences, Development and Public Health, IRCCS-Burlo Garofolo Children Hospital, University of Trieste, Trieste, 34100 Italy.
Anu Aaspõllu
Emmanouil Athanasakis
Anna Berto
Antonella Fabretto
Danilo Licastro
Maigi Külm
Francesco Testa
Patrizia Trevisi
Marju Vahter
Carmela Ziviello
Alessandro Martini
Francesca Simonelli
Sandro Banfi
Paolo Gasparini
University of Campania "Luigi Vanvitelli" · ITIRCCS Materno Infantile Burlo Garofolo · ITUniversity of Ferrara · ITUniversity of Padua · ITVitenparken · NO

Funding

Telethon TGM11SB2
6 · The paper itself

Abstract

purposeUsher syndrome is an autosomal recessive disorder characterized by hearing and vision loss. Usher syndrome is divided into three clinical subclasses (type 1, type 2, and type 3), which differ in terms of the severity and progression of hearing loss and the presence or absence of vestibular symptoms. Usher syndrome is defined by significant genetic heterogeneity, with at least 12 distinct loci described and 9 genes identified. This study aims to provide a molecular epidemiology report of Usher syndrome in Italy.

methodsMolecular data have been obtained on 75 unrelated Italian patients using the most up-to date technology available for the screening of Usher syndrome gene mutations, i.e., the genotyping microarray developed by Asper Biotech (Tartu, Estonia), which simultaneously investigates 612 different marker positions using the well established arrayed primer extension methodology (APEX).

resultsUsing this method, we found that 12% of cases (9 out of 75) harbored homozygous or compound heterozygous mutations in the gene positions analyzed, whereas 20% (15 out of 75) of the patients were characterized by the presence of only one mutated allele based on the positions analyzed. One patient was found to be compound heterozygous for mutations in two different genes and this represents an example of possible digenic inheritance in Usher syndrome. A total of 66.6% of cases (50 out of 75) were found to be completely negative for the presence of Usher syndrome gene mutations in the detected positions. Mutations detected by the array were confirmed by direct sequencing.

conclusionsThese findings highlight the efficacy of the APEX-based genotyping approach in the molecular assessment of Usher patients, suggesting the presence of alleles not yet identified and/or the involvement of additional putative genes that may account for the pathogenesis of Usher syndrome.

Indexed as

Age of OnsetAllelesDNA Mutational AnalysisGenetic HeterogeneityGenotypeHearing LossHeterozygoteHomozygoteHumansItalyMolecular EpidemiologyMutationOligonucleotide Array Sequence AnalysisPhenotypeSeverity of Illness IndexUsher Syndromes

Identifiers

PMID21738395
PMCPMC3130723
OpenAlexW1875279222

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.