Evidence map›Paper›PMID 21731776›Full record

ArticlePloS one2011

Evolutionary analysis of novel serine proteases in the venom gland transcriptome of Bitis gabonica rhinoceros.

Sakthivel Vaiyapuri, Simon C Wagstaff, Robert A Harrison, Jonathan M Gibbins, E Gail Hutchinson

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Focused Proteomics Analysis of Habu Snake (Frontiers in pharmacology · 2021
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  10. Subproteome ofThe journal of venomous animals and toxins including tropical diseases · 2019
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Connexin40 regulates platelet function.Nature communications · 2013
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Sakthivel VaiyapuriInstitute for Cardiovascular and Metabolic Research, University of Reading, Reading, United Kingdom. s.vaiyapuri@reading.ac.uk
Simon C Wagstaff
Robert A Harrison
Jonathan M Gibbins
E Gail Hutchinson
Liverpool School of Tropical Medicine · GBUniversity of Reading · GBReading Museum · GB

Funding

British Heart Foundation PG/08/100/26125
6 · The paper itself

Abstract

backgroundSerine proteases are major components of viper venom and target various stages of the blood coagulation system in victims and prey. A better understanding of the diversity of serine proteases and other enzymes present in snake venom will help to understand how the complexity of snake venom has evolved and will aid the development of novel therapeutics for treating snake bites. METHODOLOGY AND PRINCIPAL

findingsFour serine protease-encoding genes from the venom gland transcriptome of Bitis gabonica rhinoceros were amplified and sequenced. Mass spectrometry suggests the four enzymes corresponding to these genes are present in the venom of B. g. rhinoceros. Two of the enzymes, rhinocerases 2 and 3 have substitutions to two of the serine protease catalytic triad residues and are thus unlikely to be catalytically active, though they may have evolved other toxic functions. The other two enzymes, rhinocerases 4 and 5, have classical serine protease catalytic triad residues and thus are likely to be catalytically active, however they have glycine rather than the more typical aspartic acid at the base of the primary specificity pocket (position 189). Based on a detailed analysis of these sequences we suggest that alternative splicing together with individual amino acid mutations may have been involved in their evolution. Changes within amino acid segments which were previously proposed to undergo accelerated change in venom serine proteases have also been observed. CONCLUSIONS AND SIGNIFICANCE: Our study provides further insight into the diversity of serine protease isoforms present within snake venom and discusses their possible functions and how they may have evolved. These multiple serine protease isoforms with different substrate specificities may enhance the envenomation effects and help the snake to adapt to new habitats and diets. Our findings have potential for helping the future development of improved therapeutics for snake bites.

Indexed as

Evolution, MolecularGene Expression ProfilingAmino Acid SequenceAnimalsAnimal StructuresModels, MolecularMolecular Sequence DataPhylogenySequence AlignmentSequence Analysis, DNASequence Analysis, ProteinSequence Homology, Amino AcidSerine EndopeptidasesViperidaeViper VenomsSerine EndopeptidasesViper Venoms

Identifiers

PMID21731776
PMCPMC3123349
OpenAlexW1964387796

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.