Evidence map›Paper›PMID 21730970›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2011

Manipulating piggyBac transposon chromosomal integration site selection in human cells.

Claudia Kettlun, Daniel L Galvan, Alfred L George, Aparna Kaja, Matthew H Wilson

Open access · bronzeAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
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  7. Review
  8. Jumping Ahead withViruses · 2021
    Review
  9. Applications ofStem cells international · 2021
    Review
  10. Article
  11. Article
  12. A viral toolkit for recording transcription factor-DNA interactions in live mouse tissues.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Article
  14. Article
  15. In VivoInternational journal of molecular sciences · 2019
    Article
  16. RNA-guidedSynthetic biology (Oxford, England) · 2019
    Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Claudia KettlunDepartment of Medicine, Baylor College of Medicine, Houston, Texas 77030, USA.
Daniel L Galvan
Alfred L George
Aparna Kaja
Matthew H Wilson
Baylor College of Medicine · USMichael E. DeBakey VA Medical Center · USVanderbilt University · US

Funding

Hematology Training ProgramT32DK060445 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2002 to 2023
$8.3M
Training In Cell and Gene TherapyT32HL092332 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, Bruno Di Stefano · 2008 to 2026
$6.9M
Vanderbilt O'Brien Mouse Kidney Physiology and Disease CenterP30DK079341 · NIDDK · VANDERBILT UNIVERSITY · PI HARRIS, RAYMOND C. · 2008 to 2013
$4.4M
Training in Cell and Gene TherapyT32DK064717 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI HESLOP, HELEN E · 2003 to 2007
$880k
NHLBI NIH HHS T32 HL092332NIDDK NIH HHS P30 DK079341NIDDK NIH HHS T32 DK060445NIDDK NIH HHS T32DK060445NIDDK NIH HHS T32 DK064717NIDDK NIH HHS T32DK064717
6 · The paper itself

Abstract

The ability to direct gene delivery to a user-defined chromosomal location would greatly improve gene transfer applications. The piggyBac transposon system is a nonviral gene transfer system proven effective in a variety of cells and tissues, including human cells. We fused a highly site-specific synthetic zinc-finger DNA-binding domain (ZFP) to the N-terminus of the piggyBac transposase and evaluated site-directed genomic integration in human cells. Chimeric ZFP-piggyBac transposase exhibited robust gene transfer activity, targeted binding to a cognate endogenous chromosomal ZFP site in the human genome, and site-directed transposon integration into an episomal plasmid target containing a single ZFP site in human cells. We evaluated the ability of ZFP-piggyBac to direct gene integration into an engineered chromosomal ZFP target site in the human genome and consistently observed a higher degree of ZFP-piggyBac site-directed genomic integration when compared to native piggyBac. Chromatin immunoprecipitation (ChIP) experiments revealed binding of native piggyBac to our engineered TTAA-containing chromosomal target which supported integration, but not a TTAA-deficient chromosomal target which lacked integration. Our results offer insight into the requirements for using a chimeric zinc finger-piggyBac transposase to direct integration into a user-defined chromosomal location.

Indexed as

DNA Transposable ElementsBlotting, WesternChromatin ImmunoprecipitationChromosomes, HumanDNA-Binding ProteinsGenetic EngineeringGenetic VectorsGenome, HumanHEK293 CellsHumansMutagenesis, Site-DirectedPlasmidsReal-Time Polymerase Chain ReactionTransfectionTransposasesZinc FingersDNA-Binding ProteinsDNA Transposable ElementsTransposases

Identifiers

PMID21730970
PMCPMC3182353
OpenAlexW2009869892

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.