Evidence map›Paper›PMID 21730288›Full record

ArticleMolecular and cellular biology2011

Slowly progressing nucleotide excision repair in trichothiodystrophy group A patient fibroblasts.

Arjan F Theil, Julie Nonnekens, Nils Wijgers, Wim Vermeulen, Giuseppina Giglia-Mari

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Nucleotide excision repair in eukaryotes.Cold Spring Harbor perspectives in biology · 2013
    Review
  7. Article
  8. Hair Shaft Disorders in Children - An Update.Indian dermatology online journal
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Arjan F TheilDepartment of Genetics, Erasmus MC, Molewaterplein 50, 3015 GE Rotterdam, The Netherlands.
Julie Nonnekens
Nils Wijgers
Wim Vermeulen
Giuseppina Giglia-Mari
Erasmus University Rotterdam · NLErasmus MC · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trichothiodystrophy (TTD) is a rare autosomal premature-ageing and neuroectodermal disease. The photohypersensitive form of TTD is caused by inherited mutations in three of the 10 subunits of the basal transcription factor TFIIH. TFIIH is an essential transcription initiation factor that is also pivotal for nucleotide excision repair (NER). Photosensitive TTD is explained by deficient NER, dedicated to removing UV-induced DNA lesions. TTD group A (TTD-A) patients carry mutations in the smallest TFIIH subunit, TTDA, which is an 8-kDa protein that dynamically interacts with TFIIH. TTD-A patients display a relatively mild TTD phenotype, and TTD-A primary fibroblasts exhibit moderate UV sensitivity despite a rather low level of UV-induced unscheduled DNA synthesis (UDS). To investigate the rationale of this seeming discrepancy, we studied the repair kinetics and the binding kinetics of TFIIH downstream NER factors to damaged sites in TTD-A cells. Our results show that TTD-A cells do repair UV lesions, although with reduced efficiency, and that the binding of downstream NER factors on damaged DNA is not completely abolished but only retarded. We conclude that in TTD-A cells repair is not fully compromised but only delayed, and we present a model that explains the relatively mild photosensitive phenotype observed in TTD-A patients.

Indexed as

DNA DamageBlotting, WesternCell LineCells, CulturedCell SurvivalChromatin ImmunoprecipitationDNADNA-Binding ProteinsDNA RepairEndonucleasesFibroblastsHumansPyrimidine DimersTime FactorsTranscription FactorsTranscription Factor TFIIHDNADNA-Binding ProteinsEndonucleasesERCC1 protein, humanGTF2H5 protein, humanPyrimidine Dimerspyrimidine-pyrimidone dimerTranscription FactorsTranscription Factor TFIIHXeroderma Pigmentosum Group A ProteinXPA protein, human

Identifiers

PMID21730288
PMCPMC3165551
OpenAlexW2106889235

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.