Evidence map›Paper›PMID 21730134›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Cysteine scanning and modification reveal major differences between BK channels and Kv channels in the inner pore region.

Yu Zhou, Xiao-Ming Xia, Christopher J Lingle

Abstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Calcium-Activated KHandbook of experimental pharmacology · 2021
    Article
  10. Selectivity filter ion binding affinity determines inactivation in a potassium channel.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Review
  12. The action of a BK channel opener.The Journal of general physiology · 2020
    Article
  13. Article
  14. The functionally relevant site for paxilline inhibition of BK channels.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Gating modules of the AMPA receptor pore domain revealed by unnatural amino acid mutagenesis.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  17. Large-conductance CaProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. Article
  19. Hydrophobic gating in BK channels.Nature communications · 2018
    Article
  20. Review

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yu ZhouDepartment of Anesthesiology, Washington University School of Medicine, St. Louis, MO 63110, USA. zhouy@morpheus.wustl.edu
Xiao-Ming Xia
Christopher J Lingle

Funding

Ion Channel Regulation by Ca2+R01GM066215 · NIGMS · WASHINGTON UNIVERSITY · PI LINGLE, CHRISTOPHER J · 2003 to 2015
$3.6M
NIGMS NIH HHS GM066215NIGMS NIH HHS R01 GM066215
6 · The paper itself

Abstract

BK channels are regulated by two distinct physiological signals, transmembrane potential and intracellular Ca(2+), each acting through independent modular sensor domains. However, despite a presumably central role in the coupling of sensor activation to channel gating, the pore-lining S6 transmembrane segment has not been systematically studied. Here, cysteine substitution and modification studies of the BK S6 point to substantial differences between BK and Kv channels in the structure and function of the S6-lined inner pore. Gating shifts caused by introduction of cysteines define a pattern and direction of free energy changes in BK S6 distinct from Shaker. Modification of BK S6 residues identifies pore-facing residues that occur at different linear positions along aligned BK and Kv S6 segments. Periodicity analysis suggests that one factor contributing to these differences may be a disruption of the BK S6 α-helix from the unique diglycine motif at the position of the Kv hinge glycine. State-dependent MTS accessibility reveals that, even in closed states, modification can occur. Furthermore, the inner pore of BK channels is much larger than that of K(+) channels with solved crystal structures. The results suggest caution in the use of Kv channel structures as templates for BK homology models, at least in the pore-gate domain.

Indexed as

Models, MolecularProtein ConformationAmino Acid SequenceAnimalsCysteineElectrophysiologyLarge-Conductance Calcium-Activated Potassium ChannelsMolecular Sequence DataMutagenesisOocytesPotassium Channels, Voltage-GatedXenopusCysteineLarge-Conductance Calcium-Activated Potassium ChannelsPotassium Channels, Voltage-Gated

Identifiers

PMID21730134
PMCPMC3141973

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.