Evidence map›Paper›PMID 21729869›Full record

ArticleNucleic acids research2011

CKI isoforms α and ε regulate Star-PAP target messages by controlling Star-PAP poly(A) polymerase activity and phosphoinositide stimulation.

Rakesh S Laishram, Christy A Barlow, Richard A Anderson

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. The nuclear phosphoinositide response to stress.Cell cycle (Georgetown, Tex.) · 2020
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Regulation of cytoplasmic mRNA decay.Nature reviews. Genetics · 2012
    Review
  19. Article
  20. Specificity factors in cytoplasmic polyadenylation.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Rakesh S LaishramDepartment of Pharmacology, University of Wisconsin-Madison, 1300 University Ave. University of Wisconsin Medical School, Madison, WI 53706, USA.
Christy A Barlow
Richard A Anderson
University of Wisconsin–Madison · US

Funding

PHOSPHOINOSITIDE SIGNALING TO AND WITHIN THE NUCLEUSR01GM051968 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI ANDERSON, RICHARD A. · 1995 to 2012
$3.2M
Nuclear Phosphoinositide Control of 3'-end mRNA Processing and Gene ExpressionR01GM114386 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI ANDERSON, RICHARD A. · 2016 to 2019
$1.5M
Star-PAP and PIPKIalpha in the Regulation of Polyadenylation of Specific mRNAsF32GM082005 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BARLOW, CHRISTY A · 2007 to 2009
$139k
NIGMS NIH HHS F32 GM082005NIGMS NIH HHS R01 GM051968NIGMS NIH HHS R01 GM114386
6 · The paper itself

Abstract

Star-PAP is a non-canonical, nuclear poly(A) polymerase (PAP) that is regulated by the lipid signaling molecule phosphatidylinositol 4,5 bisphosphate (PI4,5P(2)), and is required for the expression of a select set of mRNAs. It was previously reported that a PI4,5P(2) sensitive CKI isoform, CKIα associates with and phosphorylates Star-PAP in its catalytic domain. Here, we show that the oxidative stress-induced by tBHQ treatment stimulates the CKI mediated phosphorylation of Star-PAP, which is critical for both its polyadenylation activity and stimulation by PI4,5P(2). CKI activity was required for the expression and efficient 3'-end processing of its target mRNAs in vivo as well as the polyadenylation activity of Star-PAP in vitro. Specific CKI activity inhibitors (IC261 and CKI7) block in vivo Star-PAP activity, but the knockdown of CKIα did not equivalently inhibit the expression of Star-PAP targets. We show that in addition to CKIα, Star-PAP associates with another CKI isoform, CKIε in the Star-PAP complex that phosphorylates Star-PAP and complements the loss of CKIα. Knockdown of both CKI isoforms (α and ε) resulted in the loss of expression and the 3'-end processing of Star-PAP targets similar to the CKI activity inhibitors. Our results demonstrate that CKI isoforms α and ε modulate Star-PAP activity and regulates Star-PAP target messages.

Indexed as

PolyadenylationCasein Kinase 1 epsilonCasein Kinase IalphaHEK293 CellsHeLa CellsHumansHydroquinonesNucleotidyltransferasesOxidative StressPhosphatidylinositol 4,5-DiphosphatePhosphorylationPolynucleotide AdenylyltransferaseRNA, Messenger2-tert-butylhydroquinoneCasein Kinase 1 epsilonCasein Kinase IalphaHydroquinonesNucleotidyltransferasesPhosphatidylinositol 4,5-DiphosphatePolynucleotide AdenylyltransferaseRNA, MessengerTUT1 protein, human

Identifiers

PMID21729869
PMCPMC3185439
OpenAlexW2002083013

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.