Evidence map›Paper›PMID 21726375›Full record

ArticleMolecular plant pathology2011

Negative regulation of defence signalling pathways by the EDR1 protein kinase.

Katy M Christiansen, Yangnan Gu, Natalie Rodibaugh, Roger W Innes

Abstract read
In one paragraph

Article in Molecular plant pathology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Identification of Raf-Like Kinases B Subfamily Genes inInternational journal of molecular sciences · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Molecular plant-microbe interactions : MPMI · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Katy M ChristiansenIndiana University, Bloomington, IN 47405, USA.
Yangnan Gu
Natalie Rodibaugh
Roger W Innes
Indiana University Bloomington · US

Funding

Programmed Cell Death and Disease Resistance in ArabidopsisR01GM063761 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI INNES, ROGER W. · 2002 to 2013
$3.5M
NIGMS NIH HHS R01 GM063761
6 · The paper itself

Abstract

The enhanced disease resistance 1 (edr1) mutant of Arabidopsis confers enhanced resistance to bacterial and fungal pathogens. To better understand how edr1-mediated resistance occurs, we performed transcriptome analyses on wild-type and edr1 plants inoculated with the fungal pathogen Golovinomyces cichoracearum (powdery mildew). The expression of many known and putative defence-associated genes was more rapidly induced, and to higher levels, in edr1 plants relative to the wild-type. Many of the genes with elevated expression encoded WRKY transcription factors and there was enrichment for their binding sites in promoters of the genes upregulated in edr1. Confocal microscopy of transiently expressed EDR1 protein showed that a significant fraction of EDR1 was localized to the nucleus, suggesting that EDR1 could potentially interact with transcription factors in the nucleus. Analysis of gene ontology annotations revealed that genes associated with the endomembrane system, defence, reactive oxygen species (ROS) production and protein kinases were induced early in the edr1 mutant, and that elevated expression of the endomembrane system, defence and ROS-related genes was maintained for at least 4 days after infection.

Indexed as

ArabidopsisArabidopsis ProteinsAscomycotaCell NucleusGene Expression Regulation, PlantPlants, Genetically ModifiedReactive Oxygen SpeciesSignal TransductionTranscription FactorsArabidopsis ProteinsEDR1 protein, ArabidopsisReactive Oxygen SpeciesTranscription Factors

Identifiers

PMID21726375
PMCPMC3296526
OpenAlexW1927851204

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.