Evidence map›Paper›PMID 21725204›Full record

ArticleEpigenetics2011

Differential vitamin D 24-hydroxylase/CYP24A1 gene promoter methylation in endothelium from benign and malignant human prostate.

Kristin K Deeb, Wei Luo, Adam R Karpf, Angela R Omilian, Wiam Bshara, Lili Tian, Michael A Tangrea, Carl D Morrison, Candace S Johnson, Donald L Trump

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 31 citations in OpenAlex.

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  16. 24-Hydroxylase in cancer: impact on vitamin D-based anticancer therapeutics.The Journal of steroid biochemistry and molecular biology · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Kristin K DeebDepartment of Pharmacology and Therapeutics, Roswell Park Cancer Institute; Buffalo, NY USA.
Wei Luo
Adam R Karpf
Angela R Omilian
Wiam Bshara
Lili Tian
Michael A Tangrea
Carl D Morrison
Candace S Johnson
Donald L Trump
Buffalo State University · USUniversity at Buffalo, State University of New York · USNational Institutes of Health · USNorth-West State Technical University · RU

Funding

ANTITUMOR MECHANISMS &THERAPEUTIC EFFECTS OF VITAMIN DR01CA067267 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JOHNSON, CANDACE S, TRUMP, DONALD L · 1995 to 2013
$5.7M
GLUCOCORTICOIDS &VITAMIN D: ROLE IN ANTI-TUMOR EFFECTSR01CA085142 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JOHNSON, CANDACE S · 2000 to 2009
$3.3M
Vitamin D in Prostate Cancer: Tumor Vasculature EffectsR01CA095045 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI JOHNSON, CANDACE S · 2002 to 2012
$3.2M
NCI NIH HHS CA067267NCI NIH HHS CA085142NCI NIH HHS CA095045NCI NIH HHS R01 CA067267NCI NIH HHS R01 CA095045
6 · The paper itself

Abstract

Epigenetic alterations occur in tumor-associated vessels in the tumor microenvironment. Methylation of the CYP24A1 gene promoter differs in endothelial cells isolated from tumors and non-tumor microenvironments in mice. The epigenetic makeup of endothelial cells of human tumor-associated vasculature is unknown due to difficulty of isolating endothelial cells populations from a heterogeneous tissue microenvironment. To ascertain CYP24A1 promoter methylation in tumor-associated endothelium, we utilized laser microdissection guided by CD31 immunohistochemistry to procure endothelial cells from human prostate tumor specimens. Prostate tissues were obtained following robotic radical prostatectomy from men with clinically localized prostate cancer. Adjacent histologically benign prostate tissues were used to compare endothelium from benign versus tumor microenvironments. Sodium bisulfite sequencing of CYP24A1 promoter region showed that the average CYP24A1 promoter methylation in the endothelium was 20% from the tumor microenvironment compared with 8.2% in the benign microenvironment (p< 0.05). A 2-fold to 17-fold increase in CYP24A1 promoter methylation was observed in the prostate tumor endothelium compared with the matched benign prostate endothelium in four patient samples, while CYP24A1 remained unchanged in two patient sample. In addition, there is no correlation of the level of CYP24A1 promoter methylation in prostate tumor-associated endothelium with that of epithelium/stroma. This study demonstrates that the CYP24A1 promoter is methylated in tumor-associated endothelium, indicating that epigenetic alterations in CYP24A1 may play a role in determining the phenotype of tumor-associated vasculature in the prostate tumor microenvironment.

Indexed as

DNA MethylationEpigenesis, GeneticGene Expression Regulation, NeoplasticPromoter Regions, GeneticCell Line, TumorCpG IslandsEndotheliumHumansLaser Capture MicrodissectionMaleProstatectomyProstatic NeoplasmsSteroid HydroxylasesTumor MicroenvironmentVitamin D3 24-HydroxylaseCYP24A1 protein, humanCyp24a1 protein, mouseSteroid HydroxylasesVitamin D3 24-Hydroxylase

Identifiers

PMID21725204
PMCPMC3219083
OpenAlexW2088351264

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.