Evidence map›Paper›PMID 21725202›Full record

ArticleEpigenetics2011

Establishment of paternal allele-specific DNA methylation at the imprinted mouse Gtl2 locus.

Kamila Nowak, Geneva Stein, Elizabeth Powell, Lu Mei He, Snehal Naik, Jane Morris, Sara Marlow, Tamara L Davis

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Epigenetic control and genomic imprinting dynamics of the Dlk1-Dio3 domain.Frontiers in cell and developmental biology · 2023
    Review
  3. Article
  4. Deletion ofInternational journal of molecular sciences · 2022
    Article
  5. Identification of the porcine IG-DMR and abnormal imprinting ofFrontiers in cell and developmental biology · 2022
    Article
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  7. Review
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  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Kamila NowakDepartment of Biology, Bryn Mawr College; Bryn Mawr, PA USA.
Geneva Stein
Elizabeth Powell
Lu Mei He
Snehal Naik
Jane Morris
Sara Marlow
Tamara L Davis
Bryn Mawr College · US

Funding

Temporal Analysis of Imprinting Marks in Germ CellsR15HD041444 · NICHD · BRYN MAWR COLLEGE · PI DAVIS, TAMARA L · 2002 to 2007
$397k
NICHD NIH HHS HD041444NICHD NIH HHS R15 HD041444
6 · The paper itself

Abstract

The monoallelic expression of imprinted genes is controlled by epigenetic factors including DNA methylation and histone modifications. In mouse, the imprinted gene Gtl2 is associated with two differentially methylated regions: the IG-DMR, which serves as a gametic imprinting mark at which paternal allele-specific DNA methylation is inherited from sperm, and the Gtl2-DMR, which acquires DNA methylation on the paternal allele after fertilization. The timeframe during which DNA methylation is acquired at secondary DMRs during post-fertilization development and the relationship between secondary DMRs and imprinted expression have not been well established. In order to better understand the role of secondary DMRs in imprinting, we examined the methylation status of the Gtl2-DMR in pre- and post-implantation embryos. Paternal allele-specific DNA methylation of this region correlates with imprinted expression of Gtl2 during post-implantation development but is not required to implement imprinted expression during pre-implantation development, suggesting that this secondary DMR may play a role in maintaining imprinted expression. Furthermore, our developmental profile of DNA methylation patterns at the Cdkn1c- and Gtl2-DMRs illustrates that the temporal acquisition of DNA methylation at imprinted genes during post-fertilization development is not universally controlled.

Indexed as

DNA MethylationGenomic ImprintingAllelesAnimalsCyclin-Dependent Kinase Inhibitor p57Embryonic DevelopmentFemaleFertilizationMaleMiceMice, Inbred C57BLProteinsRNA, Long NoncodingCdkn1c protein, mouseCyclin-Dependent Kinase Inhibitor p57MEG3 non-coding RNA, mouseProteinsRNA, Long Noncoding

Identifiers

PMID21725202
PMCPMC3359488
OpenAlexW2043611593

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.