Evidence map›Paper›PMID 21722633›Full record

ArticleExperimental cell research2011

Mislocalization of large ARF-GEFs as a potential mechanism for BFA resistance in COG-deficient cells.

Heather Flanagan-Steet, Steven Johnson, Richard D Smith, Julia Bangiyeva, Vladimir Lupashin, Richard Steet

Open access · greenAbstract read
In one paragraph

Article in Experimental cell research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Golgi inCOGnito: From vesicle tethering to human disease.Biochimica et biophysica acta. General subjects · 2020
    Review
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Heather Flanagan-SteetComplex Carbohydrate Research Center, University of Georgia, 315 Riverbend Road, Athens, GA 30602, USA. rsteet@ccrc.uga.edu
Steven Johnson
Richard D Smith
Julia Bangiyeva
Vladimir Lupashin
Richard Steet
University of Georgia · USUniversity of Arkansas for Medical Sciences · US

Funding

Characterization of mammalian COG complex-interacting intra-Golgi trafficking macR01GM083144 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI VLADIMIR V LUPASHIN · 2008 to 2026
$6.5M
NIGMS NIH HHS 1R01GM083144NIGMS NIH HHS R01 GM083144
6 · The paper itself

Abstract

Defects in subunits of the conserved oligomeric Golgi (COG) complex represent a growing subset of congenital disorders of glycosylation (CDGs). In addition to altered protein glycosylation and vesicular trafficking, Cog-deficient patient fibroblasts exhibit a striking delay in the Golgi-disrupting effects of brefeldin A (BFA). Despite the diagnostic value of this BFA resistance, the molecular basis of this response is not known. To investigate potential mechanisms of resistance, we analyzed the localization of the large ARF-GEF, GBF1, in several Cog-deficient cell lines. Our results revealed mislocalization of GBF1 to non-Golgi compartments, in particular the ERGIC, within these cells. Biochemical analysis of GBF1 in control and BFA-treated fibroblasts demonstrated that the steady-state level and membrane recruitment is not substantially affected by COG deficiency, supporting a role for the COG complex in the localization but not membrane association of GBF1. We also showed that pretreatment of fibroblasts with bafilomycin resulted in a GBF1-independent BFA resistance that appears additive with the resistance associated with COG deficiency. These data provide new insight into the mechanism of BFA resistance in Cog-deficient cells by suggesting a role for impaired ARF-GEF localization.

Indexed as

Adaptor Proteins, Vesicular TransportAnimalsBrefeldin ACHO CellsCricetinaeCricetulusCytoplasmDrug ResistanceEndoplasmic ReticulumFibroblastsGolgi ApparatusGolgi Matrix ProteinsGuanine Nucleotide Exchange FactorsHeat-Shock ProteinsHeLa CellsHumansAdaptor Proteins, Vesicular TransportARFGEF1 protein, humanbafilomycin ABrefeldin ACOG3 protein, humanCOG6 protein, humanCOG7 protein, humanERP29 protein, humanGBF1 protein, humangolgicide AGolgi Matrix ProteinsGuanine Nucleotide Exchange FactorsHeat-Shock ProteinsLMAN1 protein, humanmacrogolginMacrolidesMannose-Binding LectinsMembrane ProteinsProton-Translocating ATPasesPyridinesQuinazolinesQuinolinesRNA, Small InterferingRTKI cpdTyrphostins

Identifiers

PMID21722633
PMCPMC3159704
OpenAlexW2012506339

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.